Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2564 ATGGCTAACCACGCTGATTCACTTATTCCATTAGACATTAATGCCAATGAATGTGAAGTTGATGTGGCTTATCATTCACCAAAGGAACGTGGCCCAGAAATCCGTGATTCAGATGAAAATGATGTTGTTCCTACACCCCAAAACGGTATGATATTTGGTTCGGAGGATGAGGTGAAATCATATTATACAAAATATGCCAACCAAGTAGGTTTCGGCGTCATGACAAGAACCTCAAGGAAGGGAGCTGATGGTAAGGTTGGATATTTTATACTTGCATGTTCCAGAGAAGGATTTAGAAGAAACATGAGAAGAAATCCCATTAGAAGTGTTCCATCAAGGAAACAGAAGTGTGAAGCCAGGATCAATGTTTCTTTATGTAAAGATGGATTTTACCGTATTCAAACAGTTACACTTAATCACAATCATGAACTGAGTCCTGGTCAGGTCAACCTTAATGTTCATATTGATATGCGAGCTAAAAGAAAACTAGACCCGGAAGATCAAACTGAAGCACAGATGAACAAGAGCTTCCGATCTTCAGCGGTTGGAAATGGGGTTTATGATAATGTGGCATTGAGTCCAAATGATTGTGGAAACTACATCCGAACTGGAGGCCGGTTGATTGGTGTGGATGGAGATGGTAATGCTCTTTATAAATATTTCATGCGCATGCAAGAACAAGATTGCAATTTCTTCTATGTGATTGATTTAGATGATTATTTATGCGTGAGGAATGTTTTCTGGGCTGATGCTAGGAGTAGAGCTGCGTACAAGTCATTTGGTGATGTGGTGACATTGGATACAACATATCTCTCTGACCAATACAAATTACCTCTCGCATGTTTTGTTGGAGTGAACCATCATGGGCAATCTATACTTTTTGGTTGTGGATTGATGTCATGCAGGGACACAAAGTCATTTGTTTGGTTGTTTCAATCATGGTTACACTGTATGTGTGGTGTTTCACCAAAAGGCGTCATATCAGATGAATGCAAGGCTTTGCAAAATGCAATTAAAATTGTATTCCCCTTTGCTCGACATCGTTGGTGTTTATCGCATATAATGAAAAAATTTCCTGAAAAGCTAGGTCAACGTGCTGACTACAAGCTGATAAGTTGTCGTTTAAAAAATGCTATATATAACTCGCTCACTCCCAATGAATTTGAGATGACTTGGAAAACAACTGTGAAGGAATTTGGTCTAGAGGACAGTGAATGGTTAAATGAGTTGTACCTTGAGCGACATCGTTGGGTGCCTACCTTTGTAAAGAGTGAATTTTGGGCTGGAATGTCTACTATTCGATTTGGTGAAATCATGCATCCTTTTTTCGATGGATTTGTTGGTTGCCAAAGTACGCTGAAACAATTTCTTGATGTATATGATAATGCATTGCAAACCAGGGCAGAGAGAGAGTTTGAAGCTGATTTCCGTTCTTTTTGTATTACTCTTGCTTGTGCTACTAAGTCTCCATTTGAGCGGCAGTTTCAGACTGCATACACTCATGCAAAGTTCTTGGAGGTTCAGCGAGAATTTGTTGGAAAGGCTGATTGTAACATGGTTGTTGTTCATGACGAAGGTTCTGTTTGTCGTTATAATGTTATTGAAGATGTGATAGTAGAAGGCAAAGCCAAAGAAGCTTCGTTTGGAGTTATATTTGACAGGGTAAACTATGATGTAAAGTGCGGCTGCCACATGTTTGAGTTCAAAGGAATACTTTGTAGGCACTCACTTGCTGTACTGTCCCAAGAGCGAGTTAAAGAGATTCCATGTAAGTATGTTTTGGATAGATGGAGAACAAATCTAAAGAGGAGACATGCATATGTTAGGACCAGTTACAATGTTAAACAACTCAAACCTCGAATGGAAAGATTTGATTTGTTATCCAAGCAATTTGACTCTGTTGCTGAAGTCGCTGCTGAATTTGAGGAAACAAGTGCTTTTGTAAGTAATACCCTTTGTGACTTGAAGGAGAAACTGGAAGCATGGGCAAGCCATATGAGAAACTCATCCGAGGCGGCAGCACCAATAAGCTGTGCAATTAACGGTGCTTCTTGA 2055 0.3966 MANHADSLIPLDINANECEVDVAYHSPKERGPEIRDSDENDVVPTPQNGMIFGSEDEVKSYYTKYANQVGFGVMTRTSRKGADGKVGYFILACSREGFRRNMRRNPIRSVPSRKQKCEARINVSLCKDGFYRIQTVTLNHNHELSPGQVNLNVHIDMRAKRKLDPEDQTEAQMNKSFRSSAVGNGVYDNVALSPNDCGNYIRTGGRLIGVDGDGNALYKYFMRMQEQDCNFFYVIDLDDYLCVRNVFWADARSRAAYKSFGDVVTLDTTYLSDQYKLPLACFVGVNHHGQSILFGCGLMSCRDTKSFVWLFQSWLHCMCGVSPKGVISDECKALQNAIKIVFPFARHRWCLSHIMKKFPEKLGQRADYKLISCRLKNAIYNSLTPNEFEMTWKTTVKEFGLEDSEWLNELYLERHRWVPTFVKSEFWAGMSTIRFGEIMHPFFDGFVGCQSTLKQFLDVYDNALQTRAEREFEADFRSFCITLACATKSPFERQFQTAYTHAKFLEVQREFVGKADCNMVVVHDEGSVCRYNVIEDVIVEGKAKEASFGVIFDRVNYDVKCGCHMFEFKGILCRHSLAVLSQERVKEIPCKYVLDRWRTNLKRRHAYVRTSYNVKQLKPRMERFDLLSKQFDSVAEVAAEFEETSAFVSNTLCDLKEKLEAWASHMRNSSEAAAPISCAINGAS 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2564 684 MobiDBLite consensus disorder prediction 26 49 - -
Prci3g2564 684 Pfam FAR1 DNA-binding domain 60 145 IPR004330 -
Prci3g2564 684 Pfam SWIM zinc finger 560 581 IPR007527 GO:0008270
Prci3g2564 684 ProSiteProfiles Zinc finger SWIM-type profile. 548 584 IPR007527 GO:0008270
Prci3g2564 684 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 36 661 IPR031052 GO:0006355
Prci3g2564 684 MobiDBLite consensus disorder prediction 26 40 - -
Prci3g2564 684 SMART 26again6 559 586 IPR006564 GO:0008270
Prci3g2564 684 Pfam MULE transposase domain 263 357 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2564 Prci-Chr3 38538241 38541101 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci3g2564 MULE 2.7e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2564 - K17604 gmx:102660547 774.237