Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2563 ATGATAAGCCCCGGTGGTATTTCTGAGCTGTTTGACATTCTCGACATTAATGCCAATGAATGTGAAGTTGATGTGGCTTATCATTCACCAAAGGAACGTGGCCCAGAAATCCGTGATTCAGATGAAAATGATGTTGTTCCTACACCCCAAAACGGTATGATATTTGGTTCGGAGGATGAGGTGAAATCATATTATACAAAATATGCCAACCAAGTAGGTTTCGGCGTCATGACAAGAACCTCAAGGAAGGGAGCTGATGGTAAGGTTGGATATTTTATACTTGCATGTTCCAGAGAAGGATTTAGAAGAAACATGAGAAGAAATCCCATTAGAAGTGTTCCATCAAGGAAACAGAAGTGTGAAGCCAGGATCAATGTTTCTTTATGTAAAGATGGATTTTACCGTATTCAAACAGTTACACTTAATCACAATCATGAACTGAGTCCTGGTCAGGTCAACCTTAATGTTCATATTGATATGCGAGCTAAAAGAAAACTAGACCCGGAAGATCAAACTGAAGCACAGATGAACAAGAGCTTCCGATCTTCAGCGGTTGGAAATGGGGTTTATGATAATGTGGCATTGAGTCCAAATGATTGTGGAAACTACATCCGAACTGGAGGCCGGTTGATTGGTGTGGATGGAGATGGTAATGCTCTTTATAAATATTTCATGCGCATGCAAGAACAAGATTGCAATTTCTTCTATGTGATTGATTTAGATGATTATTTATGCGTGAGGAATGTTTTCTGGGCTGATGCTAGGAGTAGAGCTGCGTACAAGTCATTTGGTGATGTGGTGACATTGGATACAACATATCTCTCTGACCAATACAAATTACCTCTCGCATGTTTTGTTGGAGTGAACCATCATGGGCAATCTATACTTTTTGGTTGTGGATTGATGTCATGCAGGGACACAAAGTCATTTGTTTGGTTGTTTCAATCATGGTTACACTGTATGTGTGGTGTTTCACCAAAAGGCGTCATATCAGATGAATGCAAGGCTTTGCAAAATGCAATTAAAATTGTATTCCCCTTTGCTCGACATCGTTGGTGTTTATCGCATATAATGAAAAAATTTCCTGAAAAGCTAGGTCAACGTGCTGACTACAAGCTGATAAGTTGTCGTTTAAAAAATGCTATATATAACTCGCTCACTCCCAATGAATTTGAGATGACTTGGAAAACAACTGTGAAGGAATTTGGTCTAGAGGACAGTGAATGGTTAAATGAGTTGTACCTTGAGCGACATCGTTGGGTGCCTACCTTTGTAAAGAGTGAATTTTGGGCTGGAATGTCTACTATTCGATTTGGTGAAATCATGCATCCTTTTTTCGATGGATTTGTTGGTTGCCAAAGTACGCTGAAACAATTTCTTGATGTATATGATAATGCATTGCAAACCAGGGCAGAGAGAGAGTTTGAAGCTGATTTCCGTTCTTTTTGTATTACTCTTGCTTGTGCTACTAAGTCTCCATTTGAGCGGCAGTTTCAGACTGCATACACTCATGCAAAGTTCTTGGAGGTTCAGCGAGAATTTGTTGGAAAGGCTGATTGTAACATGGTTGTTGTTCATGACGAAGGTTCTGTTTGTCGTTATAATGTTATTGAAGATGTGATAGTAGAAGGCAAAGCCAAAGAAGCTTCGTTTGGAGTTATATTTGACAGGGTAAACTATGATGTAAAGTGCGGCTGCCACATGTTTGAGTTCAAAGGAATACTTTGTAGGCACTCACTTGCTGTACTGTCCCAAGAGCGAGTTAAAGAGATTCCATGTAAGTATGTTTTGGATAGATGGAGAACAAATCTAAAGAGGAGACATGCATATGTTAGGACCAGTTACAATGTTAAACAACTCAAACCTCGAATGGAAAGATTTGATTTGTTATCCAAGCAATTTGACTCTGTTGCTGAAGTCGCTGCTGAATTTGAGGAAACAAGTGCTTTTGTAAGTAATACCCTTTGTGACTTGAAGGAGAAACTGGAAGCATGGGCAAGCCATATGAGAAACTCATCCGAGGCGGCAGCACCAATAAGCTGTGCAATTAACGGTGCTTCTTGA 2064 0.3978 MISPGGISELFDILDINANECEVDVAYHSPKERGPEIRDSDENDVVPTPQNGMIFGSEDEVKSYYTKYANQVGFGVMTRTSRKGADGKVGYFILACSREGFRRNMRRNPIRSVPSRKQKCEARINVSLCKDGFYRIQTVTLNHNHELSPGQVNLNVHIDMRAKRKLDPEDQTEAQMNKSFRSSAVGNGVYDNVALSPNDCGNYIRTGGRLIGVDGDGNALYKYFMRMQEQDCNFFYVIDLDDYLCVRNVFWADARSRAAYKSFGDVVTLDTTYLSDQYKLPLACFVGVNHHGQSILFGCGLMSCRDTKSFVWLFQSWLHCMCGVSPKGVISDECKALQNAIKIVFPFARHRWCLSHIMKKFPEKLGQRADYKLISCRLKNAIYNSLTPNEFEMTWKTTVKEFGLEDSEWLNELYLERHRWVPTFVKSEFWAGMSTIRFGEIMHPFFDGFVGCQSTLKQFLDVYDNALQTRAEREFEADFRSFCITLACATKSPFERQFQTAYTHAKFLEVQREFVGKADCNMVVVHDEGSVCRYNVIEDVIVEGKAKEASFGVIFDRVNYDVKCGCHMFEFKGILCRHSLAVLSQERVKEIPCKYVLDRWRTNLKRRHAYVRTSYNVKQLKPRMERFDLLSKQFDSVAEVAAEFEETSAFVSNTLCDLKEKLEAWASHMRNSSEAAAPISCAINGAS 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2563 687 SMART 26again6 562 589 IPR006564 GO:0008270
Prci3g2563 687 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 664 IPR031052 GO:0006355
Prci3g2563 687 Pfam SWIM zinc finger 563 584 IPR007527 GO:0008270
Prci3g2563 687 MobiDBLite consensus disorder prediction 28 52 - -
Prci3g2563 687 ProSiteProfiles Zinc finger SWIM-type profile. 551 587 IPR007527 GO:0008270
Prci3g2563 687 MobiDBLite consensus disorder prediction 28 43 - -
Prci3g2563 687 Pfam MULE transposase domain 266 360 IPR018289 -
Prci3g2563 687 Pfam FAR1 DNA-binding domain 63 148 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2563 Prci-Chr3 38538241 38541101 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci3g2563 MULE 2.7e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2563 - K17604 gmx:102660547 771.541