Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2556 ATGGCTTCTTCTTCCTCTGACCCTCCTGCCAGGGCCGCGGTTGGCTGTCCCGTGGCCGAGACCTCGGATGCAGCCATCACCAGCGATCAGGTGTTTTTGTACAGGGAATTCAAGAAGGCTAAGAAAGAGAGAGGATGTACGGCCAAAGAGCGAATCAGCAAAATGCCTCCTTGTACTGCCGGCAAACGCAGCTCCATATACCGCGGTGTCACCAGGCATAGATGGACAGGTCGTTATGAAGCACATCTTTGGGATAAGAGCACGTGGAACCAAAATCAGAATAAGAAAGGAAAGCAAGTTTACTTGGGGGCATATGATGATGAAGAGGCTGCAGCTAGAGCTTATGACCTTGCTGCTCTAAAATATTGGGGCCCAGGGACTCTCATTAATTTCCCAGTGTCTGATTATACGAGAGATCTTGAAGAAATGCAGAATTTTTCAAGGGAAGAATACCTAGCATCTTTGCGACGGAAGAGCAGTGGCTTTTCAAGAGGAATCTCAAAATATCGTGGACTCTCCAGTCGATGGGAACCATCATATGGTCACATGGCTGGATCTGACTACTACAATAGCATACATTATGGTACAGGTGATGATTCAGCTACAGAAAGTGAATACTTAAGTGGTTTCAGTGTAGAAAGAAAAGTTGATCTAACGAGTTACATCAAATGGTGGGGATCTAATAAGAGTCGCCAAGCTGATGCTGGAACAAAATCATCAGAGGAAAAAAAGCGTGGTTTTGCTGGAGATCATTGCAGTGAACTCAGAACATTGGAACAGCAAGTACAACCTACTGAACCATATCAGATGCCACAGTTAGGCATGTCCCATGATGAAAAAAAGCATAAAAATCCTTCAGTTTCTGCCTTAAGTATCTTGTCTCGATCAGCTGCCTACAAGAACTTGCTAGAGAATGCATCAAAGAGAGAGGAAAATAGCATAGACCCTATAGAAAATGAAAACAAAAATAACATTGGTAAGTTGGACCGTGGCAAGGCAGTGGAGAAATCTTCAAATCATCATGATGGTGGTAATGAAAGACCTGAATCTGTAATGGGGATGAGTGGAGCTTTGTCTCTTCAAAAGAATGCTTACAGCCCGTTGGCTCCATTCTTGTCTGCACCCCTTTTGACTGCTTATAATACTACGGATCCCTTAGTTGATCCTGTTCTCTGGACGCCTCTTGTTCCTATACTTCCTGCTAGTCTTTCCCGTAATGCTGAGGTTACAAAGGCTGAGGCCAGTTCATCTTATACCCTCTTTCAGCCAGAGGACTGA 1278 0.4452 MASSSSDPPARAAVGCPVAETSDAAITSDQVFLYREFKKAKKERGCTAKERISKMPPCTAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVSDYTRDLEEMQNFSREEYLASLRRKSSGFSRGISKYRGLSSRWEPSYGHMAGSDYYNSIHYGTGDDSATESEYLSGFSVERKVDLTSYIKWWGSNKSRQADAGTKSSEEKKRGFAGDHCSELRTLEQQVQPTEPYQMPQLGMSHDEKKHKNPSVSALSILSRSAAYKNLLENASKREENSIDPIENENKNNIGKLDRGKAVEKSSNHHDGGNERPESVMGMSGALSLQKNAYSPLAPFLSAPLLTAYNTTDPLVDPVLWTPLVPILPASLSRNAEVTKAEASSSYTLFQPED 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2556 425 MobiDBLite consensus disorder prediction 308 351 - -
Prci3g2556 425 Pfam AP2 domain 66 124 IPR001471 GO:0003700|GO:0006355
Prci3g2556 425 FunFam AP2-like ethylene-responsive transcription factor 65 134 - -
Prci3g2556 425 SMART rav1_2 66 138 IPR001471 GO:0003700|GO:0006355
Prci3g2556 425 MobiDBLite consensus disorder prediction 308 347 - -
Prci3g2556 425 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Prci3g2556 425 PRINTS Ethylene responsive element binding protein signature 114 134 IPR001471 GO:0003700|GO:0006355
Prci3g2556 425 Gene3D AP2/ERF domain 66 134 IPR036955 GO:0003700|GO:0006355
Prci3g2556 425 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 42 310 - -
Prci3g2556 425 SUPERFAMILY DNA-binding domain 65 134 IPR016177 GO:0003677
Prci3g2556 425 ProSiteProfiles AP2/ERF domain profile. 66 132 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2556 Prci-Chr3 38507199 38511427 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2556 28 397 AP2-EREBP Transcription Factor Family AT2G41710 63.660 2.65e-155 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci3g2556 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2556 K09285 - gmx:100786651 639.417