Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2555 ATGGCTTCTTCTTCCTCTGACCCTCCTGCCAGGGCCGCGGTTGGCTGTCCCGTGGCCGAGACCTCGGATGCAGCCATCACCAGCGATCAGGTGTTTTTGTACAGGGAATTCAAGAAGGCTAAGAAAGAGAGAGGATGTACGGCCAAAGAGCGAATCAGCAAAATGCCTCCTTGTACTGCCGGCAAACGCAGCTCCATATACCGCGGTGTCACCAGGCATAGATGGACAGGTCGTTATGAAGCACATCTTTGGGATAAGAGCACGTGGAACCAAAATCAGAATAAGAAAGGAAAGCAAGTTTACTTGGGGGCATATGATGATGAAGAGGCTGCAGCTAGAGCTTATGACCTTGCTGCTCTAAAATATTGGGGCCCAGGGACTCTCATTAATTTCCCAGTGTCTGATTATACGAGAGATCTTGAAGAAATGCAGAATTTTTCAAGGGAAGAATACCTAGCATCTTTGCGACGGAAGAGCAGTGGCTTTTCAAGAGGAATCTCAAAATATCGTGGACTCTCCAGTCGATGGGAACCATCATATGGTCACATGGCTGGATCTGACTACTACAATAGCATACATTATGGTGATGATTCAGCTACAGAAAGTGAATACTTAAGTGGTTTCAGTGTAGAAAGAAAAGTTGATCTAACGAGTTACATCAAATGGTGGGGATCTAATAAGAGTCGCCAAGCTGATGCTGGAACAAAATCATCAGAGGAAAAAAAGCGTGGTTTTGCTGGAGATCATTGCAGTGAACTCAGAACATTGGAACAGCAAGTACAACCTACTGAACCATATCAGATGCCACAGTTAGGCATGTCCCATGATGAAAAAAAGCATAAAAATCCTTCAGTTTCTGCCTTAAGTATCTTGTCTCGATCAGCTGCCTACAAGAACTTGCTAGAGAATGCATCAAAGAGAGAGGAAAATAGCATAGACCCTATAGAAAATGAAAACAAAAATAACATTGGTAAGTTGGACCGTGGCAAGGCAGTGGAGAAATCTTCAAATCATCATGATGGTGGTAATGAAAGACCTGAATCTGTAATGGGGATGAGTGGAGCTTTGTCTCTTCAAAAGAATGCTTACAGCCCGTTGGCTCCATTCTTGTCTGCACCCCTTTTGACTGCTTATAATACTACGGATCCCTTAGTTGATCCTGTTCTCTGGACGCCTCTTGTTCCTATACTTCCTGCTAGTCTTTCCCGTAATGCTGAGGTTACAAAGGCTGAGGCCAGTTCATCTTATACCCTCTTTCAGCCAGAGGACTGA 1272 0.445 MASSSSDPPARAAVGCPVAETSDAAITSDQVFLYREFKKAKKERGCTAKERISKMPPCTAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVSDYTRDLEEMQNFSREEYLASLRRKSSGFSRGISKYRGLSSRWEPSYGHMAGSDYYNSIHYGDDSATESEYLSGFSVERKVDLTSYIKWWGSNKSRQADAGTKSSEEKKRGFAGDHCSELRTLEQQVQPTEPYQMPQLGMSHDEKKHKNPSVSALSILSRSAAYKNLLENASKREENSIDPIENENKNNIGKLDRGKAVEKSSNHHDGGNERPESVMGMSGALSLQKNAYSPLAPFLSAPLLTAYNTTDPLVDPVLWTPLVPILPASLSRNAEVTKAEASSSYTLFQPED 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2555 423 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 42 309 - -
Prci3g2555 423 MobiDBLite consensus disorder prediction 306 349 - -
Prci3g2555 423 Gene3D AP2/ERF domain 66 134 IPR036955 GO:0003700|GO:0006355
Prci3g2555 423 FunFam AP2-like ethylene-responsive transcription factor 65 134 - -
Prci3g2555 423 SMART rav1_2 66 138 IPR001471 GO:0003700|GO:0006355
Prci3g2555 423 MobiDBLite consensus disorder prediction 306 345 - -
Prci3g2555 423 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Prci3g2555 423 PRINTS Ethylene responsive element binding protein signature 114 134 IPR001471 GO:0003700|GO:0006355
Prci3g2555 423 SUPERFAMILY DNA-binding domain 65 134 IPR016177 GO:0003677
Prci3g2555 423 Pfam AP2 domain 66 124 IPR001471 GO:0003700|GO:0006355
Prci3g2555 423 ProSiteProfiles AP2/ERF domain profile. 66 132 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2555 Prci-Chr3 38507199 38511427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2555 28 395 AP2-EREBP Transcription Factor Family AT2G41710 63.395 1.78e-152 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci3g2555 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2555 K09285 - gmx:100814117 640.573