Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2550 ATGGGGGAGGAGAGAAGTGTGATGGGGTGGGAGGAGTTGACAGTGGTGGTGGAGGTGAAGGAAGCACACCAGAAGAAGAAGGTGGTGGTGAACAAGGCCACGGGGTGTGCCCAACCAGGGAGGCTCATGGCCCTCATGGGTCCTTCTGGCTCCGGCAAAACCACCCTCCTCCGCTCTCTGTCCGGAAGGCTTGCTCGGAACGTTGCAGTGACCGGCAACGTTCTAATCGGTGGGAAGAAGAGATGCTTCAATTGCAAAGAAGTGTCTTATGTGGATACAGAAGAATTGTTCTTGGGAACTTTGACGGTAAGAGAAACCCTAGCATACTCTGCAAATCTGAGGCTTCCTTCTAGAATGACCCGAGAGGAGATAAACAAGGTGGTGGAAGAAACCATAATCCAGTTGGGTCTAGAAGAATGTGCGGACAGTAAGCTTGGGAACTGGCATTTACGTGGTATTAGCAGTGGTGAAAAGAAGAGGCTCAGCATTGGCCTTGAGATTTTAACACAACCCCACGTCTTGCTTCTGGATGAACCGACGAGTGGACTTGATAGTGCCTCTGCTTTCTATGTGATTCAAACCCTATGCAGCATTGCTCATGATGGAAAGGTCGTTGTCTGTTCCATTCACCAGCCGAGCAGTGAAATCTTTAACCTTTTTGATGATCTTCTCTTGCTATCGAGCGGAGAAACTGTTTATTTTGGAGAAACAAAGATGGCTTTGAAGTTCTTTGCTGATGCAGGGTTCCCCTGTCCCACTAGAAGAAATCCTTCGGATCATTTCCTTCTCTGTGTTAATTCGGACTTTGATGCCATTACTGTAGCTCCGATGAAATCTGAACCTGCGTCATCAAATTCTACAACAGGCAATAAAACAGAAGACATTAGAGCGACACTCATTGAGAGTTACAAAAATTCAGGGCAAATAATCGATGCCAAAAGGATAATTCAGTGTTTGAAATCCAATGGAGACGAATTGATTGAGTCCAACGTAAGGGGCAATACCAGCTACTGGAAGCAGCTCTACACTTTGACCCATCGATCATTCTTAAACATGTCAAGGGACCTAGGCTACTATTGGCTGAGGATCTTTTTCTATTCACTGGCAGCCACTGGCATTGGTCTTTTCTTTTATCATCTTGGTACTGACAAGGACTCGATCTTGGCCAGAGGGAAGTGTGTATCATTCATATATGGGTTCATAATTTGTCTGTCATTTGGAGGATTACCGGTTTTCATTGAAGAATTGAAGGTGTTCTACGGTGAAAGGTCCAAAGGGCATTATGGGGAGGCTGTGTTTGTACTATCAAACATCCTGTCATCTTTCCCTTTCCTACTTGTTACGTCGCTCTTCTTTGTTACAATCACATACTCCATGGTGAAACTTCACCTGGGTTTAGCTCAATGTATTTTCTTCTTCCTCAACTTATTCGTCTGCTTATCTATCATCGAGGGCTGCCTTATGGTAGTAGCTTCACTGGTGCCTAATGTCCTCATGGGCATAGGAGTAGCAACTGGAGTAACCCTTTTCATGGTGATGTGTTCTCCATTGTTCAGACCACTACCTGACCTACCTAAGCTGTTTTGGCGCTACCCCATGTCCTACTTGAGCTTTGCTACATGGGCAGTGCAGGGTCAACTCAAGAATGACATGCTGGGGCTTGAATTTGATCCTCTGATTCCTGGTAACCCCAAAGCTAAGGGAGAACAAGTTCTGAAATTGACATTTGGGGTCTCAACTAATCATGACAAGTGGTGGGACATGACAGCATTGGTCACCCTGTTTATAGCTCACCGATTTATCCTTTTCTTAGTACTTCGGTATGACAAAAGACAGATATCACCCTTGCGGTGGTTTTATGCCAAAGTAAGTCCACACTATAGTGAAGGGTTTTCACTGAGCAATAAGCAGCGTCGTATGGCTTTCAAGAAACAGCAAGCTCTTCCGTTATCTGCTGAATATTAA 1965 0.4524 MGEERSVMGWEELTVVVEVKEAHQKKKVVVNKATGCAQPGRLMALMGPSGSGKTTLLRSLSGRLARNVAVTGNVLIGGKKRCFNCKEVSYVDTEELFLGTLTVRETLAYSANLRLPSRMTREEINKVVEETIIQLGLEECADSKLGNWHLRGISSGEKKRLSIGLEILTQPHVLLLDEPTSGLDSASAFYVIQTLCSIAHDGKVVVCSIHQPSSEIFNLFDDLLLLSSGETVYFGETKMALKFFADAGFPCPTRRNPSDHFLLCVNSDFDAITVAPMKSEPASSNSTTGNKTEDIRATLIESYKNSGQIIDAKRIIQCLKSNGDELIESNVRGNTSYWKQLYTLTHRSFLNMSRDLGYYWLRIFFYSLAATGIGLFFYHLGTDKDSILARGKCVSFIYGFIICLSFGGLPVFIEELKVFYGERSKGHYGEAVFVLSNILSSFPFLLVTSLFFVTITYSMVKLHLGLAQCIFFFLNLFVCLSIIEGCLMVVASLVPNVLMGIGVATGVTLFMVMCSPLFRPLPDLPKLFWRYPMSYLSFATWAVQGQLKNDMLGLEFDPLIPGNPKAKGEQVLKLTFGVSTNHDKWWDMTALVTLFIAHRFILFLVLRYDKRQISPLRWFYAKVSPHYSEGFSLSNKQRRMAFKKQQALPLSAEY 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2550 654 Pfam ABC-2 type transporter 340 549 IPR013525 GO:0016020|GO:0140359
Prci3g2550 654 ProSitePatterns ABC transporters family signature. 153 167 IPR017871 GO:0005524|GO:0016887
Prci3g2550 654 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 14 253 IPR003439 GO:0005524
Prci3g2550 654 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 243 IPR027417 -
Prci3g2550 654 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 4 622 - -
Prci3g2550 654 Gene3D - 11 247 IPR027417 -
Prci3g2550 654 Pfam ABC-2 type transporter 210 262 IPR043926 GO:0140359
Prci3g2550 654 Pfam ABC transporter 34 181 IPR003439 GO:0005524
Prci3g2550 654 SMART AAA_5 39 230 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2550 Prci-Chr3 38474284 38482390 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2550 37 222 Calmodulin-binding Proteins AT2G36910 28.934 1.79e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2550 K05681 - gmx:100802207 866.685