Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2548 ATGGAGGATCGCTCAAGAACTGGTTTTCACGATTTCAATGTGGCTTCAAGAAAAGCTGAAGAAGCGGCTTGGAGGCGATATGAAGCCGCAGAGTGGCTTGAAAGGGAGGTGGGCCCGCTCAGTATATCCAGTCAGCCGTCGGAGAGAGAATTCATTTCTTGCTTAAGAAATGGTCTCGTTCTCTGCAACGCAATCAACAAGATTTATGCAGGAGCCGTCCCCAAGGTCGTGGATTGTCAAATGCCTTCGCAATCAATTGCCAGGGATTTCCAGCCTCTGCCTGCCTACCAGTACTTTGAAAATGTAAGAAATTTTCTGGTTGCAGCAGCAGAATTAAAACTTCCAGCTTTTGAAGCTTCTGATCTTGAACGGGATGCTGTAGACATGGGATCAGTGTCTAAGGTTGTCGATTGCGTTTTAGCGCTTAAATTGCATCAAGAGTCCAAGCGGACAAACACTGAGAATGGAAGTAACAGGCTCTTAAGGTCTCCCTTTTTAATGCACTCTGCCAGTAGAATGCATTCAAGACCCTCAGCCGTAATCTCTTCAGATGCCTGTAGGCGCTTGGATTTGTCTGCCACATCAGATAAAGACCACTCTCTCGAGGGTGATCTTCAGAAACCAGAAGGAAAAAATGTGGAATCAATTGTTAAGCTATTGGTTGACTGTATGGTTGACTCCAAAGAGAATATTGATGGAAACTTTGCTGCTTCACTTCGTAATGCTCAACAGGATCCAATTGAGCTGTTTAGCGGGATCGTGTCAACATGTTTTGGGGATCAGCTCCAAACAAAGTTCCCTGAGTTAGCATTGCTGCTGAAGGGTTTTACAAAAGAAAGGAGCACTTTACCTAAATCAACACCCACGGCATCGGATGAATCTACACCTCAAAGTTTTCAGTGTTGCAGAAGTTGCACTGCTAAGTGCACTTGCAGCCAGAAGCATCTCTTTGACGTGCAGGAAAAAGAAGTTGTGGATCTCAAAGCTTTACTGTTGAAAACTAAGAATGAGTTTGAAGAGATGAAGTCCCAGTTTCAAAGAGATCTGAATTACCTTGGAAGCCAGGTACTGGAAATATCCACTGCTGCTTGTGGATATTACAAGGCGGTGCAGGAGAATAGCAAATTATATAATATTGTCCAAGATTTGAAAGGCAATATTCGAGTTTACTGCAGAATTAGGCCATCCTTCAGTGTTGAGTCCAAGAATGTTATAGATTTCATTGGAAAGGATGGTTCTCTAGTCCTATTAGATCCAACAAAAACACAAAAAGATGGGAGGAAAGTTTTTCAGTTTAATCGGGTTTTTGGACCAACAGCTAGCCAAGGTGAAATATACAAGGACACTCGACCACTAATTAGATCGGTGATAGATGGATATAATGTCTGTATTTTTGCCTATGGACAAACTGGATCTGGGAAGACATATACCATGAGTGGGCCATCAGGTGGATCTTCTAAAGATATGGGGATTAATTATCTTGCTTTAAATGATCTTTTCCAGATGTCTAACCAACGAAAGGACATTATAACTTACGACATTTATGTGCAAATGGTTGAGATTTACAATGAACAAGTACGAGACCTACTTGCAGAGGAAAAAACGGACAATAAATTAGAGATACGAAGTTGCAATGACAATGGCTTGAACCTTCCAGATGCTACATTGCGTTCTGTAAAATCGACGCATGATGTAGTGAGCCTCATGAAACTTGGTGAGGTTAACCGAGCTGTTAGTTCCACTTCCATCAACAACCGGAGCAGTCGTTCTCACAGTGTTCTTACTGTGCATGTTCATGGCAAAGATATCTCTGGGAGCTCCATTCGTGGTTGCCTGCATTTGATAGACCTTGCTGGAAGTGAGCGAGTGGAGAAGTCTGAAGTTACAGGGGAAAGACTAAAAGAGGCACAATTCATCAACAAGTCTCTTTCCTGTTTAGGGGATGTGATCACAGCACTGGCTCAGAAGAATTCTCACATCCCTTACAGGAATAGTAAACTCACACTTCTATTGCAGGATTCCTTAGGTGGGAAAGCCAAAACATTGATGTTTGCTCATGTGAGTCCTGAAGAAGAGTCCTTCGGAGAAACAATCAGTACTCTAAAGTTTGCTCAGCGAGCTTCCACCGTGGAACTTGGAACAGCTCGATCAAATAGAGAAAGTAGTGAGATTATGCAACTTAAGGAACAGGTTGAGAACCTTAAGATGGCATTGTCAAACAAGGAAGCACAGAGAATGCAGCTAAGCAAGGCAAAAGAACCACGGACTCCATCTGAGAAAACTCCATTGCGCCTTAGAAGACTTAGCATTGAGAATTGCAGTGCCACAAGGACTGACAACAATTCTGTGAAACCCGAGGATAAGATTGGAATCAAATCACCGTCGTTTGTCCCTCGTTCAAGAAGATTGAGCTTGGAAGGTTCCAAAAGCATCAACAAGAAAGACACGGTACAGCCAAAGGATATTACTGATGTAAGCAAAACTTTACAGTTGGATTCAGTGTCTCAACAGAAAAACCGTCCTCCACGAGATGCAGAAGCAGTGCCAAAACCATTCGGCCATTTCAGCCATAGCAGTTCCAAGATAGAGTTGCACACTAAAGCTCCTCGAAGCCCTACAAGCATTAAATATCAGAAGAAGGTGATGAAAATAGATTGTGCAGCTCAAATTCATCCTCTTACGCCTGAACTACGATGGCCTGACAAGGTTGAAACGTATAAAGCTGCAAGGAGTGATGTTGCAGTTTCCATGGATTTCCAGACACCAAATGTGGTTAGCAACACAAACGGTAAAGGTTCCCAGATAAGGAGATCCTTACGGACCATTGGAAAGCTCATCAATGGACAAGATAAGAGGAGCCAACAAAATACGGTGGAAGTGAAGTCACCCATGAAGAGCAGTAATAATCACATAAATGAAGCAAAATCACCACCAAGTTCTGTTGCGAGAACAAGGAGAAGGCAATCTCTAACGGGGATTCAAGCAACTGGCGCCGAAAACTCCCGTAGATCTTCTCTCGGAGGGAAGTCTGTGGCCTCCGGCGAGAAGGAGCAGAGAAACACGAAAACGCCTCCTCCAATACGGTCAGCCACCAAGAATGGAAAACGATGGCTATAG 3117 0.4341 MEDRSRTGFHDFNVASRKAEEAAWRRYEAAEWLEREVGPLSISSQPSEREFISCLRNGLVLCNAINKIYAGAVPKVVDCQMPSQSIARDFQPLPAYQYFENVRNFLVAAAELKLPAFEASDLERDAVDMGSVSKVVDCVLALKLHQESKRTNTENGSNRLLRSPFLMHSASRMHSRPSAVISSDACRRLDLSATSDKDHSLEGDLQKPEGKNVESIVKLLVDCMVDSKENIDGNFAASLRNAQQDPIELFSGIVSTCFGDQLQTKFPELALLLKGFTKERSTLPKSTPTASDESTPQSFQCCRSCTAKCTCSQKHLFDVQEKEVVDLKALLLKTKNEFEEMKSQFQRDLNYLGSQVLEISTAACGYYKAVQENSKLYNIVQDLKGNIRVYCRIRPSFSVESKNVIDFIGKDGSLVLLDPTKTQKDGRKVFQFNRVFGPTASQGEIYKDTRPLIRSVIDGYNVCIFAYGQTGSGKTYTMSGPSGGSSKDMGINYLALNDLFQMSNQRKDIITYDIYVQMVEIYNEQVRDLLAEEKTDNKLEIRSCNDNGLNLPDATLRSVKSTHDVVSLMKLGEVNRAVSSTSINNRSSRSHSVLTVHVHGKDISGSSIRGCLHLIDLAGSERVEKSEVTGERLKEAQFINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGKAKTLMFAHVSPEEESFGETISTLKFAQRASTVELGTARSNRESSEIMQLKEQVENLKMALSNKEAQRMQLSKAKEPRTPSEKTPLRLRRLSIENCSATRTDNNSVKPEDKIGIKSPSFVPRSRRLSLEGSKSINKKDTVQPKDITDVSKTLQLDSVSQQKNRPPRDAEAVPKPFGHFSHSSSKIELHTKAPRSPTSIKYQKKVMKIDCAAQIHPLTPELRWPDKVETYKAARSDVAVSMDFQTPNVVSNTNGKGSQIRRSLRTIGKLINGQDKRSQQNTVEVKSPMKSSNNHINEAKSPPSSVARTRRRQSLTGIQATGAENSRRSSLGGKSVASGEKEQRNTKTPPPIRSATKNGKRWL 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2548 1038 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 386 743 IPR027417 -
Prci3g2548 1038 SMART kinesin_4 384 718 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g2548 1038 Pfam Kinesin motor domain 392 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g2548 1038 PANTHER KINESIN-LIKE PROTEIN KLP-3 30 951 IPR027640 GO:0003777|GO:0007018
Prci3g2548 1038 MobiDBLite consensus disorder prediction 948 1008 - -
Prci3g2548 1038 CDD CH_AtKIN14-like 25 144 - -
Prci3g2548 1038 MobiDBLite consensus disorder prediction 948 1038 - -
Prci3g2548 1038 SMART ch_5 25 142 IPR001715 GO:0005515
Prci3g2548 1038 FunFam Kinesin-like protein KIN-14A 328 712 - -
Prci3g2548 1038 SUPERFAMILY Calponin-homology domain, CH-domain 16 149 IPR036872 -
Prci3g2548 1038 Coils Coil 324 344 - -
Prci3g2548 1038 Gene3D - 15 148 IPR036872 -
Prci3g2548 1038 FunFam Kinesin-like protein KIN-14L 11 174 - -
Prci3g2548 1038 MobiDBLite consensus disorder prediction 742 824 - -
Prci3g2548 1038 Gene3D Kinesin motor domain 328 713 IPR036961 -
Prci3g2548 1038 MobiDBLite consensus disorder prediction 746 766 - -
Prci3g2548 1038 ProSiteProfiles Kinesin motor domain profile. 386 710 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g2548 1038 MobiDBLite consensus disorder prediction 806 821 - -
Prci3g2548 1038 ProSiteProfiles Calponin homology (CH) domain profile. 23 147 IPR001715 GO:0005515
Prci3g2548 1038 MobiDBLite consensus disorder prediction 853 873 - -
Prci3g2548 1038 PRINTS Kinesin heavy chain signature 581 598 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g2548 1038 PRINTS Kinesin heavy chain signature 459 480 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g2548 1038 PRINTS Kinesin heavy chain signature 660 681 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g2548 1038 PRINTS Kinesin heavy chain signature 611 629 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g2548 1038 Coils Coil 717 751 - -
Prci3g2548 1038 Pfam Calponin homology (CH) domain 25 146 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2548 Prci-Chr3 38455085 38461852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2548 332 756 Calmodulin-binding Proteins AT5G65930 39.408 1.58e-73 264