Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2544 ATGGAGAGATTTTTGAAGGATTTCGAGCTGGAGCCCAAGAATCCATCCACCGAAGCCATGAGGAGATGGAGATCCGCCGTCTGGTTGGTCAAGAACCGCAGCAGAAGGTTCCGCATGGTAGCCGATCTCAACAAACGTTTTGAAGCCGAGAAGATGAAGCAGAAAATCCAGGAAACAATTCGGATTGCTCTTTATGTTCAAAAGGCGGCATTGCATTTTATTGATGCAGGAGTTCGAGTTGACTACAGTCTATCAGATGAGGCAAGAGAAGCTGGTTTTGGTATTAATCCAGATGACATTGCCTCCATTGTTCGTAGCCATGATTACAAGAAATTGAGAATGATTGGAGGAGTTAAAGGGGCTGCATCGAAATTATCTATCTCCTCCACGGATAAAGGTGTCAATAAAAACAGTATAAATACCAGGCAACAGATTTATGGGTTCAACCGTTATACAGAGAAGCCTACTAAAACCTTCCTGTTGTTTGTGTGGGAAGCATTGCATGACTTAACGCTTATCATTCTTATGGTTTGTGCTTTAGTGTCTATAAGTGTAGGGATTGCTACCGAAGGGTGGCCGAAGGGGGTGTATGATGGTCTGGGGATCATACTTAGTGTATTCTTGGTAGTCATTGTTACTGCTGTTAGTGACTACAAGCAATCGCTGCAGTTCAGGGATTTGGACAGGGAGAAGAAAAAGATCTTTGTTCAGGTAACCAGGGATGGGAAAAGGGAGAAGATATCAATTTATGATCTGGTAGTGGGAGATATTGTCCATTTGTCAACTGGGGATCAAGTTCCAGCTGATGGGATTTTCATATGGGGATACAGCTTGCTGATCGATGAGTCAAGTTTGTCAGGTGAGAGCGAACCAGTAAATGTAAATGAAGAAAAACCTTTCCTTCTTTCAGGAACAAAAGTGCAAGATGGTCAAGGGAAGATGTTAGTTACAACTGTTGGCATGAGGACTGAATGGGGAAAGTTGATGGAAACCATAAATGAGGGTGGAGAGGATGAGACCCCATTGCAAGTGAAATTGAATGGAGTCGCTACAATTATTGGTAAGATTGGTTTGGCTTTTGCTGTAGTAACGTTTCTGGTGTTGACAGTAAGGTTTGTGGTGGAAAAGGCACTGCACGGTGAGTTTACTACTTGGTCTTCGAATGATGCAATGAAGATGCTGGACTACTTTGCTATTGCCGTTACCATAATAGTTGTTGCAGTTCCTGAAGGATTGCCACTGGCGGTAACTCTCAGCCTTGCTTTTGCAATGAAAAAATTAATGAATGAAAGGGCACTTGTGAGGCATCTTGCAGCATGTGAGACAATGGGTTCATCCAGTTGCATTTGCACAGATAAGACGGGGACGCTGACCACTAATCACATGGTGGTTGATAAAATATGGCTATGTGACAAATCCATGGAAATGAAAGGTAAAGAGAGTGGAGATAAATTGAAAATGGAGGTATCTGAAGAAGTTCTGAGCATCCTTTTCCAAGCTATATTTCAAAATACTTCTGCTGAAGTAGTTAAAGATAAGGATGGAAAGAATAAAATATTGGGAACACCGACAGAATCTGCATTATTGGAATTTGGCTTGTTTCTGGGTGGCAATTTTGGTGCTCAGCGCAAAAAGTACGAGATTGTTAAGATTGAGCCTTTCAATTCAGTCAGGAAGAAGATGTCTGTCCTTGTGCGTCTTCCTGATGGACGCATACGAGCTTTCTGTAAAGGTGCATCAGAAATAATATTAAGAATGTGTGACAAAATTATTGATTCTGATGGAAATCCAGTTGATCTTCCTGAAGATCGAGCAAAGAATGTCTCTGATGTGATAAATGGTTTTGCCTCTGAAGCGTTGAGAACTCTTTGTTTGGCTGTCAAAGATATAAATGATACCCAAGGGGAGACTAGTATCCCTGATGACGGCTATACACTGATAGCCATTGTAGGAATCAAGGATCCTGTGCGCCCTGGGGTCAAAGAAGCTGTTCAAACTTGTTTAGCAGCTGGAATAACAGTACGTATGGTCACTGGTGATAATATACATACAGCCAAGGCTATAGCTAAAGAATGTGGTATACTTACTGACGGTGTTGCCATTGAAGGACCAGAATTTCGAAACCTGTCTCTTGAGCAAATGAGGGAGACCATACCCAGAATTCAGGTAATGGCACGATCCTTACCGCTTGACAAACATACCCTAGTTACGCATTTGCGGAATATGTTTGGTGAGGTTGTTGCTGTTACAGGCGATGGAACCAATGACGCGCCTGCACTGCATGAGTCGGACATTGGACTTGCCATGGGCATAGCTGGAACTGAGGTTGCTAAAGAAAATGCTGATGTCATTATAATGGATGATAACTTCTCAACTATTGTCAATGTGGCGAGATGGGGACGAGCAGTGTACATAAATATTCAGAAATTTGTACAGTTTCAGTTAACAGTCAATGTGGTTGCTCTGGTGATCAACTTCTTTTCTGCATGCTTCACAGGATCTGCTCCTCTAACAGCTGTACAGTTGCTTTGGGTCAACTTGATTATGGACACCCTGGGTGCACTTGCCCTGGCCACAGAACCTCCTAATGATGAGCTCATGAAAAGGCCTCCTGTTGGTAGAGGAGCAAGCTTTATCACCAAAGCCATGTGGAGAAATATCATGGGTCAAAGTATATATCAACTGATCGTCCTGGCAATTCTCACTTTTGATGGGAAAAACCTTCTGAGACTCAATGGTCCAGATGCAACCAGGGTCCTGAACACGTTGATATTCAACTCCTTTGTCTTTTGCCAGGTTTTTAATGAGATCAACAGCCGAGACATGGAAAAGATAAACATATTGAGAGGCATGTTTGACAGCTGGATATTTTTAGCCGTAATTTTTTCCACAGTGGCATTTCAAGCAGTCATCGTTGAGTTCTTGGGAACATTTGCCAACACTGTACCTCTGAACCGGCAATTATGGTTACTGAGTGTGTTGATTGGAGCAGTGGGCTTGCCCATAGGGGCTATCCTGAAGTGCATTCCAGTTGAAAGAGATGCTCCAAAGCACCACGATGGCTATGACGCATTGCCATCTGGTCCTGACTTGGCTTAA 3099 0.4292 MERFLKDFELEPKNPSTEAMRRWRSAVWLVKNRSRRFRMVADLNKRFEAEKMKQKIQETIRIALYVQKAALHFIDAGVRVDYSLSDEAREAGFGINPDDIASIVRSHDYKKLRMIGGVKGAASKLSISSTDKGVNKNSINTRQQIYGFNRYTEKPTKTFLLFVWEALHDLTLIILMVCALVSISVGIATEGWPKGVYDGLGIILSVFLVVIVTAVSDYKQSLQFRDLDREKKKIFVQVTRDGKREKISIYDLVVGDIVHLSTGDQVPADGIFIWGYSLLIDESSLSGESEPVNVNEEKPFLLSGTKVQDGQGKMLVTTVGMRTEWGKLMETINEGGEDETPLQVKLNGVATIIGKIGLAFAVVTFLVLTVRFVVEKALHGEFTTWSSNDAMKMLDYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNERALVRHLAACETMGSSSCICTDKTGTLTTNHMVVDKIWLCDKSMEMKGKESGDKLKMEVSEEVLSILFQAIFQNTSAEVVKDKDGKNKILGTPTESALLEFGLFLGGNFGAQRKKYEIVKIEPFNSVRKKMSVLVRLPDGRIRAFCKGASEIILRMCDKIIDSDGNPVDLPEDRAKNVSDVINGFASEALRTLCLAVKDINDTQGETSIPDDGYTLIAIVGIKDPVRPGVKEAVQTCLAAGITVRMVTGDNIHTAKAIAKECGILTDGVAIEGPEFRNLSLEQMRETIPRIQVMARSLPLDKHTLVTHLRNMFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFSTIVNVARWGRAVYINIQKFVQFQLTVNVVALVINFFSACFTGSAPLTAVQLLWVNLIMDTLGALALATEPPNDELMKRPPVGRGASFITKAMWRNIMGQSIYQLIVLAILTFDGKNLLRLNGPDATRVLNTLIFNSFVFCQVFNEINSRDMEKINILRGMFDSWIFLAVIFSTVAFQAVIVEFLGTFANTVPLNRQLWLLSVLIGAVGLPIGAILKCIPVERDAPKHHDGYDALPSGPDLA 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2544 1032 SFLD p-type atpase 432 802 IPR044492 -
Prci3g2544 1032 Pfam E1-E2 ATPase 235 429 - -
Prci3g2544 1032 SUPERFAMILY Calcium ATPase, transmembrane domain M 119 1011 IPR023298 -
Prci3g2544 1032 FunFam Calcium-transporting ATPase 460 655 - -
Prci3g2544 1032 SFLD Haloacid Dehalogenase 432 802 - -
Prci3g2544 1032 FunFam Calcium-transporting ATPase 767 1013 - -
Prci3g2544 1032 Gene3D - 165 1008 - -
Prci3g2544 1032 PRINTS H+-transporting ATPase (proton pump) signature 608 626 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci3g2544 1032 PRINTS H+-transporting ATPase (proton pump) signature 750 766 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci3g2544 1032 PRINTS H+-transporting ATPase (proton pump) signature 782 807 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci3g2544 1032 CDD P-type_ATPase_Ca_PMCA-like 139 883 - -
Prci3g2544 1032 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Prci3g2544 1032 Gene3D - 15 76 - -
Prci3g2544 1032 FunFam Calcium-transporting ATPase 15 75 - -
Prci3g2544 1032 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 47 IPR024750 GO:0005516
Prci3g2544 1032 Pfam Cation transport ATPase (P-type) 504 590 - -
Prci3g2544 1032 SUPERFAMILY HAD-like 449 855 IPR036412 -
Prci3g2544 1032 SUPERFAMILY Calcium ATPase, transduction domain A 235 331 IPR008250 -
Prci3g2544 1032 FunFam Calcium-transporting ATPase 648 795 - -
Prci3g2544 1032 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Prci3g2544 1032 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Prci3g2544 1032 PRINTS P-type cation-transporting ATPase superfamily signature 670 680 - -
Prci3g2544 1032 PRINTS P-type cation-transporting ATPase superfamily signature 774 786 - -
Prci3g2544 1032 PRINTS P-type cation-transporting ATPase superfamily signature 750 769 - -
Prci3g2544 1032 PRINTS P-type cation-transporting ATPase superfamily signature 648 659 - -
Prci3g2544 1032 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 660 IPR023299 GO:0000166
Prci3g2544 1032 Gene3D - 460 655 IPR023299 GO:0000166
Prci3g2544 1032 FunFam Calcium-transporting ATPase 212 333 - -
Prci3g2544 1032 SMART Cation_ATPase_N_a_2 121 187 IPR004014 -
Prci3g2544 1032 Gene3D - 132 333 - -
Prci3g2544 1032 PANTHER CATION TRANSPORTING ATPASE 79 1011 - -
Prci3g2544 1032 Pfam Cation transporting ATPase, C-terminus 835 1008 IPR006068 -
Prci3g2544 1032 NCBIfam calcium-translocating P-type ATPase, PMCA-type 105 1012 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Prci3g2544 1032 Pfam Cation transporter/ATPase, N-terminus 117 182 IPR004014 -
Prci3g2544 1032 Gene3D - 447 795 IPR023214 -
Prci3g2544 1032 NCBIfam HAD-IC family P-type ATPase 547 696 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci3g2544 1032 NCBIfam HAD-IC family P-type ATPase 720 837 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci3g2544 1032 NCBIfam HAD-IC family P-type ATPase 202 472 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2544 Prci-Chr3 38400372 38416082 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2544 56 1029 Primary Pumps ATPases AT3G57330 72.513 0.0 1466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2544 K01537 - gmx:100783489 1640.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g2544 3 38400372 38416082 Prci3g2544 3 38400372 38416082 ECH