Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2543 ATGGAGAGATTTTTGAAGGATTTCGAGCTGGAGCCCAAGAATCCATCCACCGAAGCCATGAGGAGATGGAGATCCGCCGTCTGGTTGGTCAAGAACCGCAGCAGAAGGTTCCGCATGGTAGCCGATCTCAACAAACGTTTTGAAGCCGAGAAGATGAAGCAGAAAATCCAGGAAACAATTCGGATTGCTCTTTATGTTCAAAAGGCGGCATTGCATTTTATTGATGGAGTTCGAGTTGACTACAGTCTATCAGATGAGGCAAGAGAAGCTGGTTTTGGTATTAATCCAGATGACATTGCCTCCATTGTTCGTAGCCATGATTACAAGAAATTGAGAATGATTGGAGGAGTTAAAGGGGCTGCATCGAAATTATCTATCTCCTCCACGGATAAAGGTGTCAATAAAAACAGTATAAATACCAGGCAACAGATTTATGGGTTCAACCGTTATACAGAGAAGCCTACTAAAACCTTCCTGTTGTTTGTGTGGGAAGCATTGCATGACTTAACGCTTATCATTCTTATGGTTTGTGCTTTAGTGTCTATAAGTGTAGGGATTGCTACCGAAGGGTGGCCGAAGGGGGTGTATGATGGTCTGGGGATCATACTTAGTGTATTCTTGGTAGTCATTGTTACTGCTGTTAGTGACTACAAGCAATCGCTGCAGTTCAGGGATTTGGACAGGGAGAAGAAAAAGATCTTTGTTCAGGTAACCAGGGATGGGAAAAGGGAGAAGATATCAATTTATGATCTGGTAGTGGGAGATATTGTCCATTTGTCAACTGGGGATCAAGTTCCAGCTGATGGGATTTTCATATGGGGATACAGCTTGCTGATCGATGAGTCAAGTTTGTCAGGTGAGAGCGAACCAGTAAATGTAAATGAAGAAAAACCTTTCCTTCTTTCAGGAACAAAAGTGCAAGATGGTCAAGGGAAGATGTTAGTTACAACTGTTGGCATGAGGACTGAATGGGGAAAGTTGATGGAAACCATAAATGAGGGTGGAGAGGATGAGACCCCATTGCAAGTGAAATTGAATGGAGTCGCTACAATTATTGGTAAGATTGGTTTGGCTTTTGCTGTAGTAACGTTTCTGGTGTTGACAGTAAGGTTTGTGGTGGAAAAGGCACTGCACGGTGAGTTTACTACTTGGTCTTCGAATGATGCAATGAAGATGCTGGACTACTTTGCTATTGCCGTTACCATAATAGTTGTTGCAGTTCCTGAAGGATTGCCACTGGCGGTAACTCTCAGCCTTGCTTTTGCAATGAAAAAATTAATGAATGAAAGGGCACTTGTGAGGCATCTTGCAGCATGTGAGACAATGGGTTCATCCAGTTGCATTTGCACAGATAAGACGGGGACGCTGACCACTAATCACATGGTGGTTGATAAAATATGGCTATGTGACAAATCCATGGAAATGAAAGGTAAAGAGAGTGGAGATAAATTGAAAATGGAGGTATCTGAAGAAGTTCTGAGCATCCTTTTCCAAGCTATATTTCAAAATACTTCTGCTGAAGTAGTTAAAGATAAGGATGGAAAGAATAAAATATTGGGAACACCGACAGAATCTGCATTATTGGAATTTGGCTTGTTTCTGGGTGGCAATTTTGGTGCTCAGCGCAAAAAGTACGAGATTGTTAAGATTGAGCCTTTCAATTCAGTCAGGAAGAAGATGTCTGTCCTTGTGCGTCTTCCTGATGGACGCATACGAGCTTTCTGTAAAGGTGCATCAGAAATAATATTAAGAATGTGTGACAAAATTATTGATTCTGATGGAAATCCAGTTGATCTTCCTGAAGATCGAGCAAAGAATGTCTCTGATGTGATAAATGGTTTTGCCTCTGAAGCGTTGAGAACTCTTTGTTTGGCTGTCAAAGATATAAATGATACCCAAGGGGAGACTAGTATCCCTGATGACGGCTATACACTGATAGCCATTGTAGGAATCAAGGATCCTGTGCGCCCTGGGGTCAAAGAAGCTGTTCAAACTTGTTTAGCAGCTGGAATAACAGTACGTATGGTCACTGGTGATAATATACATACAGCCAAGGCTATAGCTAAAGAATGTGGTATACTTACTGACGGTGTTGCCATTGAAGGACCAGAATTTCGAAACCTGTCTCTTGAGCAAATGAGGGAGACCATACCCAGAATTCAGGTAATGGCACGATCCTTACCGCTTGACAAACATACCCTAGTTACGCATTTGCGGAATATGTTTGGTGAGGTTGTTGCTGTTACAGGCGATGGAACCAATGACGCGCCTGCACTGCATGAGTCGGACATTGGACTTGCCATGGGCATAGCTGGAACTGAGGTTGCTAAAGAAAATGCTGATGTCATTATAATGGATGATAACTTCTCAACTATTGTCAATGTGGCGAGATGGGGACGAGCAGTGTACATAAATATTCAGAAATTTGTACAGTTTCAGTTAACAGTCAATGTGGTTGCTCTGGTGATCAACTTCTTTTCTGCATGCTTCACAGGATCTGCTCCTCTAACAGCTGTACAGTTGCTTTGGGTCAACTTGATTATGGACACCCTGGGTGCACTTGCCCTGGCCACAGAACCTCCTAATGATGAGCTCATGAAAAGGCCTCCTGTTGGTAGAGGAGCAAGCTTTATCACCAAAGCCATGTGGAGAAATATCATGGGTCAAAGTATATATCAACTGATCGTCCTGGCAATTCTCACTTTTGATGGGAAAAACCTTCTGAGACTCAATGGTCCAGATGCAACCAGGGTCCTGAACACGTTGATATTCAACTCCTTTGTCTTTTGCCAGGTTTTTAATGAGATCAACAGCCGAGACATGGAAAAGATAAACATATTGAGAGGCATGTTTGACAGCTGGATATTTTTAGCCGTAATTTTTTCCACAGTGGCATTTCAAGCAGTCATCGTTGAGTTCTTGGGAACATTTGCCAACACTGTACCTCTGAACCGGCAATTATGGTTACTGAGTGTGTTGATTGGAGCAGTGGGCTTGCCCATAGGGGCTATCCTGAAGTGCATTCCAGTTGAAAGAGATGCTCCAAAGCACCACGATGGCTATGACGCATTGCCATCTGGTCCTGACTTGGCTTAA 3096 0.4289 MERFLKDFELEPKNPSTEAMRRWRSAVWLVKNRSRRFRMVADLNKRFEAEKMKQKIQETIRIALYVQKAALHFIDGVRVDYSLSDEAREAGFGINPDDIASIVRSHDYKKLRMIGGVKGAASKLSISSTDKGVNKNSINTRQQIYGFNRYTEKPTKTFLLFVWEALHDLTLIILMVCALVSISVGIATEGWPKGVYDGLGIILSVFLVVIVTAVSDYKQSLQFRDLDREKKKIFVQVTRDGKREKISIYDLVVGDIVHLSTGDQVPADGIFIWGYSLLIDESSLSGESEPVNVNEEKPFLLSGTKVQDGQGKMLVTTVGMRTEWGKLMETINEGGEDETPLQVKLNGVATIIGKIGLAFAVVTFLVLTVRFVVEKALHGEFTTWSSNDAMKMLDYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNERALVRHLAACETMGSSSCICTDKTGTLTTNHMVVDKIWLCDKSMEMKGKESGDKLKMEVSEEVLSILFQAIFQNTSAEVVKDKDGKNKILGTPTESALLEFGLFLGGNFGAQRKKYEIVKIEPFNSVRKKMSVLVRLPDGRIRAFCKGASEIILRMCDKIIDSDGNPVDLPEDRAKNVSDVINGFASEALRTLCLAVKDINDTQGETSIPDDGYTLIAIVGIKDPVRPGVKEAVQTCLAAGITVRMVTGDNIHTAKAIAKECGILTDGVAIEGPEFRNLSLEQMRETIPRIQVMARSLPLDKHTLVTHLRNMFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFSTIVNVARWGRAVYINIQKFVQFQLTVNVVALVINFFSACFTGSAPLTAVQLLWVNLIMDTLGALALATEPPNDELMKRPPVGRGASFITKAMWRNIMGQSIYQLIVLAILTFDGKNLLRLNGPDATRVLNTLIFNSFVFCQVFNEINSRDMEKINILRGMFDSWIFLAVIFSTVAFQAVIVEFLGTFANTVPLNRQLWLLSVLIGAVGLPIGAILKCIPVERDAPKHHDGYDALPSGPDLA 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2543 1031 Gene3D - 164 1007 - -
Prci3g2543 1031 SUPERFAMILY HAD-like 448 854 IPR036412 -
Prci3g2543 1031 NCBIfam HAD-IC family P-type ATPase 719 836 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci3g2543 1031 NCBIfam HAD-IC family P-type ATPase 546 695 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci3g2543 1031 NCBIfam HAD-IC family P-type ATPase 201 471 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci3g2543 1031 Gene3D - 131 332 - -
Prci3g2543 1031 Gene3D - 446 794 IPR023214 -
Prci3g2543 1031 Gene3D - 15 75 - -
Prci3g2543 1031 PANTHER CATION TRANSPORTING ATPASE 78 1010 - -
Prci3g2543 1031 FunFam Calcium-transporting ATPase 211 332 - -
Prci3g2543 1031 FunFam Calcium-transporting ATPase 459 654 - -
Prci3g2543 1031 CDD P-type_ATPase_Ca_PMCA-like 138 882 - -
Prci3g2543 1031 FunFam Calcium-transporting ATPase 15 75 - -
Prci3g2543 1031 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 47 IPR024750 GO:0005516
Prci3g2543 1031 PRINTS P-type cation-transporting ATPase superfamily signature 647 658 - -
Prci3g2543 1031 PRINTS P-type cation-transporting ATPase superfamily signature 773 785 - -
Prci3g2543 1031 PRINTS P-type cation-transporting ATPase superfamily signature 280 294 - -
Prci3g2543 1031 PRINTS P-type cation-transporting ATPase superfamily signature 749 768 - -
Prci3g2543 1031 PRINTS P-type cation-transporting ATPase superfamily signature 669 679 - -
Prci3g2543 1031 PRINTS P-type cation-transporting ATPase superfamily signature 449 463 - -
Prci3g2543 1031 FunFam Calcium-transporting ATPase 766 1012 - -
Prci3g2543 1031 Pfam E1-E2 ATPase 234 428 - -
Prci3g2543 1031 NCBIfam calcium-translocating P-type ATPase, PMCA-type 104 1011 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Prci3g2543 1031 FunFam Calcium-transporting ATPase 647 794 - -
Prci3g2543 1031 Pfam Cation transport ATPase (P-type) 503 589 - -
Prci3g2543 1031 SMART Cation_ATPase_N_a_2 120 186 IPR004014 -
Prci3g2543 1031 SFLD Haloacid Dehalogenase 431 801 - -
Prci3g2543 1031 SUPERFAMILY Calcium ATPase, transduction domain A 234 330 IPR008250 -
Prci3g2543 1031 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 455 659 IPR023299 GO:0000166
Prci3g2543 1031 SUPERFAMILY Calcium ATPase, transmembrane domain M 118 1010 IPR023298 -
Prci3g2543 1031 Pfam Cation transporting ATPase, C-terminus 834 1007 IPR006068 -
Prci3g2543 1031 PRINTS H+-transporting ATPase (proton pump) signature 607 625 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci3g2543 1031 PRINTS H+-transporting ATPase (proton pump) signature 781 806 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci3g2543 1031 PRINTS H+-transporting ATPase (proton pump) signature 749 765 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci3g2543 1031 SFLD p-type atpase 431 801 IPR044492 -
Prci3g2543 1031 Gene3D - 459 654 IPR023299 GO:0000166
Prci3g2543 1031 ProSitePatterns E1-E2 ATPases phosphorylation site. 451 457 IPR018303 -
Prci3g2543 1031 Pfam Cation transporter/ATPase, N-terminus 116 181 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2543 Prci-Chr3 38400372 38416082 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2543 56 1028 Primary Pumps ATPases AT3G57330 72.410 0.0 1459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2543 K01537 - gmx:100783489 1634