Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2530 ATGGCAAAGTGGAGCTGCTGGTTTGGATGTGGCAAGAAGCACTCAACTTGTGAGTCAAAGCCCAAAAATTCAAAGAGATGGAGTTGTGGTCTTGGGGGGGTCAAGCAGAAACAGCATCCCACACTTACAGGACCAAACAGAACGCTTAGTGAAGCGAGAGAAGAACAGAGAAAGCACGCAATGACAGTGGCTGTTGCAACAGCAGCAGCTGCTGAGGCTGCAGTTGCTGCTGCTCATGCTGCTGCTGAGGTTGTCAGGCTCACAGGTGCTTCCCGCTCCTACTCATATCTCTCCAAGGGAAACCGAAACTTGGCCGCTACTAAAATTCAAAGTGCATACCGTGGACATCTGGCCAGGAAAGCATTCAGAGCACTGAAGGGAATTATCAGACTGCAAGCTATAGCTCGCGGTCGGGCTGTGAGACGTCAAATGGGTTTGCTTTCCAACGGAAGAAAGCAGGTAGGAATCCAGAAAATCAGCAGCCATGCAGCAGAAGGAATCAACAAAAAAGAAAAGAGCAAGCTGCTTCTTAAGAAGAAAACGAAGTTGGAAGATACGGACATGAAACCTGAATGCCATAGTCAAAGAATTTGGGATTGCAGCTTACACTCAAAAGAAGACGTTGAAGCTATATGGTTGAAAAAGCAAGAGGCTATTATTAAAAGACAACGCATGAAGCAGTACTCTTTCTCACATCGGGAAAGAAAATTTTGCCACGTTGGGGTTGAATCTGTTCCCCATATGGAATTTAGAGGGGAGAGCTGCCGTACTCTAGGACAATGGCTGGACAGAGAAAAATGTAATGGAGATGTGTTTTATAAAACAGCAATTCCTTCAAACTTGATCGCGAGGGAATGGTACGATACAACACAAGTAGCAGAGAAGAATGTGAAAATAGAAGAACACTTGCAAGAAGACGAATTGAGTACAGTCACTTCACAGCTTTCATTTCCCAGGAGGTCATATTCTTGGGTGAAGAAAATTTCAGTTGCAGATGAAAGTTCCATGCAAAGTTCCCCAGTTTTTCCAACATTTATGGGCGTGACAGAACGTGTGAGAGCAAAAGCAAGGTCCATGAGCACTCCGAGGCAAAGAGCAGGATTTCTGGATTTATGCTCCGATCAGACAGATTGTAAGAGTGACGGCAGAACTTTTAGGTCTTCTTGTCATGAAGCATCTACAAGCGCCAATGAAGAAAATGAAATTTCTCAGCAGAGATGTCAGGGTGTCAAGTACCGCTTGTATCGTTAG 1251 0.45 MAKWSCWFGCGKKHSTCESKPKNSKRWSCGLGGVKQKQHPTLTGPNRTLSEAREEQRKHAMTVAVATAAAAEAAVAAAHAAAEVVRLTGASRSYSYLSKGNRNLAATKIQSAYRGHLARKAFRALKGIIRLQAIARGRAVRRQMGLLSNGRKQVGIQKISSHAAEGINKKEKSKLLLKKKTKLEDTDMKPECHSQRIWDCSLHSKEDVEAIWLKKQEAIIKRQRMKQYSFSHRERKFCHVGVESVPHMEFRGESCRTLGQWLDREKCNGDVFYKTAIPSNLIAREWYDTTQVAEKNVKIEEHLQEDELSTVTSQLSFPRRSYSWVKKISVADESSMQSSPVFPTFMGVTERVRAKARSMSTPRQRAGFLDLCSDQTDCKSDGRTFRSSCHEASTSANEENEISQQRCQGVKYRLYR 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2530 416 Pfam IQ calmodulin-binding motif 105 123 IPR000048 GO:0005515
Prci3g2530 416 ProSiteProfiles IQ motif profile. 102 130 IPR000048 GO:0005515
Prci3g2530 416 MobiDBLite consensus disorder prediction 29 54 - -
Prci3g2530 416 PANTHER IQ-DOMAIN 5-RELATED 27 393 - -
Prci3g2530 416 Gene3D - 101 152 - -
Prci3g2530 416 SMART iq_5 101 123 IPR000048 GO:0005515
Prci3g2530 416 Pfam Protein of unknown function (DUF4005) 333 394 IPR025064 -
Prci3g2530 416 ProSiteProfiles IQ motif profile. 126 153 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2530 Prci-Chr3 38235650 38239034 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2530 1 382 IQD Protein Family AT5G03960 42.184 2.10e-57 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2530 - - pcin:129306532 787.719