Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2494 ATGGGAATGGCTGCGGAGTCCCAGTTCCACGTTTTGGCCGTAGATGATAGCCTCATAGACAGGAAGCTCATTGAGAGGCTGCTCAAGACCTCTTCCTATCAAGTTACCACGGTGGATTCCGGGAGCAAGGCTCTGGAATTCCTAGGCTTGAGCGAGAATGACCGGATCGACCCCGGCTCGCTGTCGGTTTCTCCTGGCAATCATCAGGAAGTGGAGGTGAATCTTATTATTACCGACTACTGTATGCCTGGCATGACAGGCTATGATTTGCTCAAGAAAATAAAGGAATCTTCGTCTTTGAGAAATATACCGGTGGTGATTATGTCGTCGGAGAATGTGCCTTCAAGAATTAGCAGATGCTTGGAGGAAGGAGCAGAGGAATTTTTTCTCAAGCCAGTGAGGCTGTCAGATTTGAATAAGCTCCGACCCCATTTGATGAAGACAAAGTTGAAAGAACAAAGGCCTGAAACGCAAGAAAATCCTGAAAACCCACGAGTTCAAACTGAAGAAAATCAAACTGCTGTGCAACAACATATTATATCACAGCCACTACTAGATCAACAACAACCACAATCACCGCGAGCAGCCAGTAATAACAAGAGAAAGGCCATAGAACAGCAGGGGCTGTCGCCTGAGACTGACAGAACGAGACCTAGATACAGTGACATAGCAACGGTGGTGTGA 684 0.4693 MGMAAESQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLSENDRIDPGSLSVSPGNHQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLRPHLMKTKLKEQRPETQENPENPRVQTEENQTAVQQHIISQPLLDQQQPQSPRAASNNKRKAIEQQGLSPETDRTRPRYSDIATVV 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2494 227 SMART REC_2 9 142 IPR001789 GO:0000160
Prci3g2494 227 CDD REC_typeA_ARR 11 141 - -
Prci3g2494 227 SUPERFAMILY CheY-like 8 153 IPR011006 -
Prci3g2494 227 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 176 IPR045279 GO:0009736
Prci3g2494 227 Gene3D - 10 217 - -
Prci3g2494 227 MobiDBLite consensus disorder prediction 160 214 - -
Prci3g2494 227 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Prci3g2494 227 MobiDBLite consensus disorder prediction 147 227 - -
Prci3g2494 227 Pfam Response regulator receiver domain 11 140 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2494 Prci-Chr3 37992064 37994329 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2494 1 227 Response Regulator Gene Family AT3G57040 65.401 2.83e-98 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci3g2494 Response_reg 7.6e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2494 K14492 - gmx:100814494 315.464