Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2475 ATGATCTCTCAGCCGTCTACCATGGCTGCAACGTTAATATTTGTGGTTCTTGCACATATATTTACGTCGGTTACTTCACTGTCAGAAGCTGATAAGATTACCAGTCTGCCAGGGCAGCCGCCGGTCAAGTTTAAGCAGTACTCAGGTTATATTACTGTCGATGAGAACCAGCACAGAGCTCTATTTTACTATTTTGTTGAAGCAGAATCAGAACCTGCTTCTAAGCCACTTGTTCTCTGGTTAAATGGAGGGCCTGGTTGTTCGTCTGTGGGAGCTGGGGCTTTCGTTGAACATGGACCTTTCAAACCAAGTGAAAAAGTTCTCCAGAGAAATGAATATAGTTGGAACAAAGAGGCAAATATGCTATACTTGGAATCACCGGCTGGTGTTGGTTTCTCCTACTCTGCTAATGAATCGTTCTATGAATTTGTAGACGATGAAATCACAGCAAGAGACAATCTTGTTTTCCTACAACGTTGGTTTGCTAGATTCCCAGAGTACGAAAGCAATGATTTCTTCTTGACGGGGGAGAGCTATGCGGGTCACTACGTTCCCCAACTTGCACGGCTCATTGTTCGAACCAAAGCAAAGTTCAATCTCAAGGGGATAGCTATAGGGAATCCTCTTCTGGAATTTAATACTGATCTAAATTCTAGAGCTGAATTTTTTTGGGCACATGGACTGATATCAGATTCAACTTATAAGATATTCACCACGGTGTGCAATTTTTCCCAAATTTGGAGACAATATCACAGCGAGACTCCGAGTGTCAGTTGTGCAGAAGTGAATAAATTAATACAGAGGGAGGTCGGTAAGTTCGTTAATCAATATGACGTCACTCTCGATGTTTGTTTTTCATCCATAGATATGCAGGCTCAGATGCTAAATCAGCCGCAAGAGACAGCCGAGATAGATGTTTGTTTGGAAGATGAAACATCAACATATTTGAACAGGAAAGAAGTACAAGAAGCTCTCCACGCTAAGCTAGTGGGAGTTATCGATTGGTCTGTTTGTAGCGAGGTGCTCGCGTACGACTATCATAATCTAGAAAAACCGACAGTTCCTATTCTAGGTGAACTTGTTGAGTCTGGCATCCAGGTTTTCGTGTACAGTGGAGATCAAGATTCAGTGATCCCATTGACCGGGACACGTTCTATGGTGAATAAATTAGCCAAGGAGCTAGGACTTAATACGACTGTGCCTTATAGAGCCTGGTTCAAGGGGAAACAGGTTGCTGGATGGACACAAGTTTACGGTAACATCTTATCATTTGCCACCATAAGAGGGGCAGGTCATGAAGCTCCATTTTCACAGCCAGAGAGATCACTCATTCTATTCAAAGCATTGCTCGAGGGAAAGCCCCTTCCGGATGCAGCCCCTTCAAGATAA 1389 0.4327 MISQPSTMAATLIFVVLAHIFTSVTSLSEADKITSLPGQPPVKFKQYSGYITVDENQHRALFYYFVEAESEPASKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSEKVLQRNEYSWNKEANMLYLESPAGVGFSYSANESFYEFVDDEITARDNLVFLQRWFARFPEYESNDFFLTGESYAGHYVPQLARLIVRTKAKFNLKGIAIGNPLLEFNTDLNSRAEFFWAHGLISDSTYKIFTTVCNFSQIWRQYHSETPSVSCAEVNKLIQREVGKFVNQYDVTLDVCFSSIDMQAQMLNQPQETAEIDVCLEDETSTYLNRKEVQEALHAKLVGVIDWSVCSEVLAYDYHNLEKPTVPILGELVESGIQVFVYSGDQDSVIPLTGTRSMVNKLAKELGLNTTVPYRAWFKGKQVAGWTQVYGNILSFATIRGAGHEAPFSQPERSLILFKALLEGKPLPDAAPSR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2475 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Prci3g2475 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Prci3g2475 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Prci3g2475 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Prci3g2475 462 SUPERFAMILY alpha/beta-Hydrolases 33 456 IPR029058 -
Prci3g2475 462 Gene3D - 353 452 - -
Prci3g2475 462 Gene3D - 307 342 - -
Prci3g2475 462 Pfam Serine carboxypeptidase 37 451 IPR001563 GO:0004185|GO:0006508
Prci3g2475 462 FunFam Carboxypeptidase 26 456 - -
Prci3g2475 462 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Prci3g2475 462 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
Prci3g2475 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 439 IPR001563 GO:0004185|GO:0006508
Prci3g2475 462 FunFam Carboxypeptidase 353 452 - -
Prci3g2475 462 Gene3D alpha/beta hydrolase 27 285 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2475 Prci-Chr3 37804425 37806977 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2475 315 455 Calmodulin-binding Proteins AT2G22960 29.078 1.05e-16 76.3