Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2474 ATGATCTCTCAGCCGTCTACCATGGCTGCAACGTTAATATTTGTGGTTCTTGCACATATATTTACGTCGGTTACTTCACTGTCAGAAGCTGATAAGATTACCAGTCTGCCAGGGCAGCCGCCGGTCAAGTTTAAGCAGTACTCAGGTTATATTACTGTCGATGAGAACCAGCACAGAGCTCTATTTTACTATTTTGTTGAAGCAGAATCAGAACCTGCTTCTAAGCCACTTGTTCTCTGGTTAAATGGAGGGCCTGGTTGTTCGTCTGTGGGAGCTGGGGCTTTCGTTGAACATGGACCTTTCAAACCAAGTGAAAAAGTTCTCCAGAGAAATGAATATAGTTGGAACAAAGAGGCAAATATGCTATACTTGGAATCACCGGCTGGTGTTGGTTTCTCCTACTCTGCTAATGAATCGTTCTATGAATTTGTAGACGATGAAATCACAGGTTCTTTCACTTCATTTTACGCATTCAAGCAGTTAGGTAGTACTAGAATGCTCACTGTTAGGCGTGCAAGAGACAATCTTGTTTTCCTACAACGTTGGTTTGCTAGATTCCCAGAGTACGAAAGCAATGATTTCTTCTTGACGGGGGAGAGCTATGCGGGTCACTACGTTCCCCAACTTGCACGGCTCATTGTTCGAACCAAAGCAAAGTTCAATCTCAAGGGGATAGCTATAGGGAATCCTCTTCTGGAATTTAATACTGATCTAAATTCTAGAGCTGAATTTTTTTGGGCACATGGACTGATATCAGATTCAACTTATAAGATATTCACCACGGTGTGCAATTTTTCCCAAATTTGGAGACAATATCACAGCGAGACTCCGAGTGTCAGTTGTGCAGAAGTGAATAAATTAATACAGAGGGAGGTCGGTAAGTTCGTTAATCAATATGACGTCACTCTCGATGTTTGTTTTTCATCCATAGATATGCAGGCTCAGATGCTAAATCAGCCGCAAGAGACAGCCGAGATAGATGTTTGTTTGGAAGATGAAACATCAACATATTTGAACAGGAAAGAAGTACAAGAAGCTCTCCACGCTAAGCTAGTGGGAGTTATCGATTGGTCTGTTTGTAGCGAGGTGCTCGCGTACGACTATCATAATCTAGAAAAACCGACAGTTCCTATTCTAGGTGAACTTGTTGAGTCTGGCATCCAGGTTTTCGTGTACAGTGGAGATCAAGATTCAGTGATCCCATTGACCGGGACACGTTCTATGGTGAATAAATTAGCCAAGGAGCTAGGACTTAATACGACTGTGCCTTATAGAGCCTGGTTCAAGGGGAAACAGGTTGCTGGATGGACACAAGTTTACGGTAACATCTTATCATTTGCCACCATAAGAGGGGCAGGTCATGAAGCTCCATTTTCACAGCCAGAGAGATCACTCATTCTATTCAAAGCATTGCTCGAGGGAAAGCCCCTTCCGGATGCAGCCCCTTCAAGATAA 1455 0.4316 MISQPSTMAATLIFVVLAHIFTSVTSLSEADKITSLPGQPPVKFKQYSGYITVDENQHRALFYYFVEAESEPASKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSEKVLQRNEYSWNKEANMLYLESPAGVGFSYSANESFYEFVDDEITGSFTSFYAFKQLGSTRMLTVRRARDNLVFLQRWFARFPEYESNDFFLTGESYAGHYVPQLARLIVRTKAKFNLKGIAIGNPLLEFNTDLNSRAEFFWAHGLISDSTYKIFTTVCNFSQIWRQYHSETPSVSCAEVNKLIQREVGKFVNQYDVTLDVCFSSIDMQAQMLNQPQETAEIDVCLEDETSTYLNRKEVQEALHAKLVGVIDWSVCSEVLAYDYHNLEKPTVPILGELVESGIQVFVYSGDQDSVIPLTGTRSMVNKLAKELGLNTTVPYRAWFKGKQVAGWTQVYGNILSFATIRGAGHEAPFSQPERSLILFKALLEGKPLPDAAPSR 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2474 484 Gene3D - 375 474 - -
Prci3g2474 484 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 461 IPR001563 GO:0004185|GO:0006508
Prci3g2474 484 FunFam Carboxypeptidase 28 308 - -
Prci3g2474 484 Pfam Serine carboxypeptidase 37 473 IPR001563 GO:0004185|GO:0006508
Prci3g2474 484 Gene3D - 329 364 - -
Prci3g2474 484 Gene3D alpha/beta hydrolase 27 307 IPR029058 -
Prci3g2474 484 FunFam Carboxypeptidase 375 474 - -
Prci3g2474 484 SUPERFAMILY alpha/beta-Hydrolases 33 478 IPR029058 -
Prci3g2474 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Prci3g2474 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 182 207 IPR001563 GO:0004185|GO:0006508
Prci3g2474 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 444 457 IPR001563 GO:0004185|GO:0006508
Prci3g2474 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Prci3g2474 484 ProSitePatterns Serine carboxypeptidases, serine active site. 196 203 IPR018202 GO:0004185
Prci3g2474 484 ProSitePatterns Serine carboxypeptidases, histidine active site. 444 461 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2474 Prci-Chr3 37804425 37806978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2474 337 477 Calmodulin-binding Proteins AT2G22960 29.078 9.24e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2474 K16297 - gmx:100805028 698.738