Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2462 ATGGCATCAAGCTCAATGTCATCCTCAGGGTCATGGTCTGCTAAGGAAAACAAAGCCTTTGAAATGGCCCTGGCAGTTTATGACAAGGACACCCCTGACCGTTGGTACAATGTTGCCAAGGCTGTTGGTGGGAAAACTCCTGAGGAAGTGAAGAGACACTACGATCTCCTTTTGGATGACCTGAAGCGTATCGAGTCTGGCCGTGTGGCCGTCCCTAATTACAACAAATCTGGAGGCTCTGACGAGGAAAAAAGGCTGAGGAGCTTGAAGCTCCAGTGA 279 0.4982 MASSSMSSSGSWSAKENKAFEMALAVYDKDTPDRWYNVAKAVGGKTPEEVKRHYDLLLDDLKRIESGRVAVPNYNKSGGSDEEKRLRSLKLQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2462 92 MobiDBLite consensus disorder prediction 71 92 - -
Prci3g2462 92 Gene3D - 2 71 - -
Prci3g2462 92 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Prci3g2462 92 FunFam Transcription factor SRM1 4 71 - -
Prci3g2462 92 ProSiteProfiles SANT domain profile. 7 54 IPR017884 -
Prci3g2462 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 84 IPR044636 GO:0003700
Prci3g2462 92 SUPERFAMILY Homeodomain-like 4 60 IPR009057 -
Prci3g2462 92 SMART sant 8 60 IPR001005 -
Prci3g2462 92 CDD SANT 16 58 IPR001005 -
Prci3g2462 92 MobiDBLite consensus disorder prediction 78 92 - -
Prci3g2462 92 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2462 Prci-Chr3 37668042 37669035 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci3g2462 Myb_DNA-binding 5.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2462 - - csav:115700854 142.51