Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2455 ATGAAGTCCGGGTCACTGGAATACTGGAGGAATTACTTTCGAACTGCAAATTCTGATATATTCGATATAATTGACCACGCGATCATGGTGGCGGTTTGGGATTGTCCGAAGGAATTTAGATTACGAAGAGACGGAATTGCGGAACGTTTGTTTTCTTCTAGATTGACCCGTTGTGTGGGGTGTGATCGATTGGAGTTGGCGGTATCTGGTGATGACGAGGAAGATGGAGGTTGTAAGAGTGGTTTTGATCGAGATGCTACTGAATTAGAAGCAGGAGCTAGTAAAGAGAGCAAGGTCAATAGTAGCAGAGACGATCATGGAGAGATGGACAGGAACAAAGTTAGTACTTTTAGTTTTGGAGAAGCTGAGGCATTGACTGATGAGATTGAAGAAGAGTCTCAGATGGTTGAGGAGGTTATGAGGATCAAAGACATTCTCCATAACAGCAAGGAAGAGCCTGATTCAGTACTATTTGAGTCATTGAGGAGGCTCCAGCTGCTAGCACTGAACGTGGATCTTCTTAAGGGAACTGAAATTGGAAAGGCTGTCAATCCTCTCCGGAAGCATGGATCAAAGGAGATCCGTCAACTTGCACGAACTCTTATTGATGGCTGGAAAGAAATGGTAGATGAATGGGTCAAGTCCACGGCAGCTATAGCAGGTTCAGCAGAAGGAACCCCAGATTCAGTTAATCCATCAGTGGTTGATGAAGAGGAAGGGCTTCCTTCACCTCCAATGGATGAAGGGGCTTTCCTTGCAGCTCCAACTGGTCCAATAGAACTCTCACAGTTCTTTGATGGCATGGATGATGATGGAAATTTTCGACAAAGTGGGGAATTCATGAAGACTCGCGAACATATCAGAAAACCATCTATGGACAGTCAAAACGTTGCAAAGAGAAAACCACAGGCTTCCAGAGAGGCCAATGAGAGTAAATGTCACCAAATGAAGAAAAATGAGGTTGCTGCGAGACAAAGTAAACCGGTCTGCACTGATGCTGGCCCTGGGAGGCCACCAAAATCCAGCTTGCAGCAAAAAAGCAACACAGTACCAAAGATGCAGCAGAAACAAGAGAAGAGTGCTATCCCGAAGAGGCCTCTTGTTACTGAGCAAGATAAATTCAAGTGTTCAGATGACGTTTCAGTCCAAGTGAAACTAGAAGCAACTAAGAGGAAACTTCAGGAGTCTTACCAACAAGCTGAAAATGCCAAGAGGCAGCGAACGATACAGGTTATGGAGTTGCATGATCTTCCAAAGCAAGGGAACGGCCACCGAAATCCGCACTTCAAGTCTGGGAACCTCAACAAGCACTGGGCTCATGGACGAAGATAG 1332 0.4542 MKSGSLEYWRNYFRTANSDIFDIIDHAIMVAVWDCPKEFRLRRDGIAERLFSSRLTRCVGCDRLELAVSGDDEEDGGCKSGFDRDATELEAGASKESKVNSSRDDHGEMDRNKVSTFSFGEAEALTDEIEEESQMVEEVMRIKDILHNSKEEPDSVLFESLRRLQLLALNVDLLKGTEIGKAVNPLRKHGSKEIRQLARTLIDGWKEMVDEWVKSTAAIAGSAEGTPDSVNPSVVDEEEGLPSPPMDEGAFLAAPTGPIELSQFFDGMDDDGNFRQSGEFMKTREHIRKPSMDSQNVAKRKPQASREANESKCHQMKKNEVAARQSKPVCTDAGPGRPPKSSLQQKSNTVPKMQQKQEKSAIPKRPLVTEQDKFKCSDDVSVQVKLEATKRKLQESYQQAENAKRQRTIQVMELHDLPKQGNGHRNPHFKSGNLNKHWAHGRR 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2455 443 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 134 221 IPR035441 -
Prci3g2455 443 SMART TFS2_5 136 211 IPR003617 GO:0005634
Prci3g2455 443 MobiDBLite consensus disorder prediction 338 356 - -
Prci3g2455 443 ProSiteProfiles TFIIS N-terminal domain profile. 137 212 IPR017923 -
Prci3g2455 443 MobiDBLite consensus disorder prediction 285 365 - -
Prci3g2455 443 MobiDBLite consensus disorder prediction 220 243 - -
Prci3g2455 443 MobiDBLite consensus disorder prediction 303 321 - -
Prci3g2455 443 CDD TFIIS_I 137 210 - -
Prci3g2455 443 MobiDBLite consensus disorder prediction 417 443 - -
Prci3g2455 443 Pfam TFIIS helical bundle-like domain 161 209 IPR017923 -
Prci3g2455 443 Coils Coil 383 410 - -
Prci3g2455 443 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 3 431 IPR044805 -
Prci3g2455 443 Coils Coil 122 142 - -
Prci3g2455 443 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 127 220 IPR035441 -
Prci3g2455 443 MobiDBLite consensus disorder prediction 89 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2455 Prci-Chr3 37632300 37636240 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Prci3g2455 Med26 1.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2455 - - gmx:100775579 636.336