Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2448 ATGGCCACTAGAACCGTTGTTCCACAACAAGCAGTCAGAGGAGAGGCAGTGGTCGGAGGAGTAAAGCAGCAGAAGAAAAATGGAGCAGTGGAGGGAAGAAGTCGCAGAGCCCTTGGCGACATAGGAAATCAGGTGGCTGTTAGAGGAATTGAGGTCGTCAAGCCCAACCGTCCCGTCACCAGGAGCTTCCGAGCCCAGCTACTTGCTAATGCCCAAGCTGCTGCTGTAAACAACAAGAAACAAGCCTGTGCAAATGTCGGTGGACCCCCTCCTGTTTTCGATGTGATTGCTAATAGAGCCGCGCCTAAGCCTGCTCAGAAAATAGTCTCTGTTAAACCTAGGAATGAAGGTGCTGCTGAAACAAACTCGAAAGAAGAAACTAAAAAGGACAAGACTGTGAACAAGAAGAAAGAGGGAGATGAAAACTCAAAGAAGAAACCACACTCTCTTACTTCGGTACTCACAGCTCGAAGCAAGGCAGCATGTGGTGTGACCAACAAACCAAAGGAGCAGATTGCCCATATAGATGCGGCCGACGCTGATAATGAGCTTGCGGCCGTGGAGTATATTGAAGACATTTACAAGTTCTATAAGCTAGTTGAGAATGAGAACCGTCCTCACGACTACATTCACTCACAGCCTGAGATTAATGAAAAGATGAGAGCAATATTGGTGGACTGGCTCATAGATGTGCACTCCAAGTTCGATCTCTCGCTTGAAACTCTTTATCTGACCATCAATATAATAGATCGGTTCCTTTCAACCAAGATCGTTCCAAGAAGGGAGCTTCAATTGGTTGGCATCAGCGCCATGCTTATGGCTTCCAAGTATGAAGAAATCTGGCCCCCTCAGGTCAACGACTTTGTTTTCCTGTCGGACAGAGCTTATACCCATGAACAGATACTTGCGATGGAGAAAACCATGCTGGGAAAGCTGGAATGGACCTTGACAGTACCCACGCACTATGTGTTCCTGGTTCGTTTTATCAAGGCATCACTCCCAGATGAGGAGTTGGAAAACACGGTTCATTTTCTTGCTGAGTTAGGACTGATGAATTACGGGAGCATGATAACGCACAGCCCATCGAAGGTTGCGGCGTCAGCAGTGTACGCGGCTCGGTGCACTCTGAATAAGAGCCCCTTATGGAACGAGACGCTTGGTCTACATACGGGTTACTCAGAAGAACAGCTCATGGATTGTGCAAGAGAATTGGTGAGGTGGCACTCGATGGGCGCGAGCGCGAAGCTGCAGGCAGTGTATAGGAAGTACTCAAATGTGAAGAGAGGAGCAGTGGCGCTGCTTCCACCGGCGAAGAATCTCTTGCAGTCAGCGGAAGAAGGAAGGTGA 1347 0.4863 MATRTVVPQQAVRGEAVVGGVKQQKKNGAVEGRSRRALGDIGNQVAVRGIEVVKPNRPVTRSFRAQLLANAQAAAVNNKKQACANVGGPPPVFDVIANRAAPKPAQKIVSVKPRNEGAAETNSKEETKKDKTVNKKKEGDENSKKKPHSLTSVLTARSKAACGVTNKPKEQIAHIDAADADNELAAVEYIEDIYKFYKLVENENRPHDYIHSQPEINEKMRAILVDWLIDVHSKFDLSLETLYLTINIIDRFLSTKIVPRRELQLVGISAMLMASKYEEIWPPQVNDFVFLSDRAYTHEQILAMEKTMLGKLEWTLTVPTHYVFLVRFIKASLPDEELENTVHFLAELGLMNYGSMITHSPSKVAASAVYAARCTLNKSPLWNETLGLHTGYSEEQLMDCARELVRWHSMGASAKLQAVYRKYSNVKRGAVALLPPAKNLLQSAEEGR 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2448 448 CDD CYCLIN_AtCycB-like_rpt2 319 436 - -
Prci3g2448 448 SMART cyclin_7 226 310 IPR013763 -
Prci3g2448 448 SMART cyclin_7 323 406 IPR013763 -
Prci3g2448 448 SMART Cyclin_C_2 319 437 IPR004367 -
Prci3g2448 448 PIRSF Cyclin_A_B_D_E 1 447 IPR046965 GO:0016538|GO:0044772
Prci3g2448 448 Gene3D - 206 317 - -
Prci3g2448 448 ProSitePatterns Cyclins signature. 221 252 IPR006671 -
Prci3g2448 448 MobiDBLite consensus disorder prediction 118 147 - -
Prci3g2448 448 MobiDBLite consensus disorder prediction 106 152 - -
Prci3g2448 448 FunFam G2/mitotic-specific cyclin-1 306 432 - -
Prci3g2448 448 Pfam Cyclin, C-terminal domain 319 436 IPR004367 -
Prci3g2448 448 SUPERFAMILY Cyclin-like 181 316 IPR036915 -
Prci3g2448 448 Gene3D - 192 432 - -
Prci3g2448 448 PANTHER CYCLINS 138 425 IPR039361 -
Prci3g2448 448 CDD CYCLIN_AtCycB-like_rpt1 169 314 - -
Prci3g2448 448 Pfam Cyclin, N-terminal domain 192 316 IPR006671 -
Prci3g2448 448 SUPERFAMILY Cyclin-like 318 438 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2448 Prci-Chr3 37597351 37599894 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2448 1 447 Core Cell Cycle Gene Families AT4G37490 52.838 1.40e-147 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2448 K21777 - gmx:547919 598.586