Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2447 ATGAAGGAGGAGGACTCGAGTTGGTTCTCGAGATGGGACGAGGAACTTCCTTCCCCGGAGGATCTCATGCCTCTTTCCCAAACCCTAATCACGCCTGATCTTGCCATGGCTTTCGACATCCGAAACCCCCACAGTAATAGCCCTCACCATCAAATCCCTCAGCCCGCAGCTCCTTCGAATCCCTTGCCTTCTCCCGGAAATCCCACGCAGCCCAACTCTGCTGAATTTGCTGATTCCGCCGAGTTGGGTTCTGGAACCGCAGGGGAAGAGCCCGCACGCACCCTCAAGCGCCCTCGTCTCGTATGGACTCCACAGCTTCACAAAAGGTTCGTGGATGCTGTGGCTCACTTGGGTATCAAAAATGCTGTGCCAAAAACAATAATGCAGCTGATGAGTGTGGACGGCTTGACCAGGGAAAACGTGGCCAGTCATTTGCAAAAATATCGACTTTATTTGAAGCGCATGCAGGGGCTGTCCGCCGGTGGAGCCGGAAGCGGAGTTGGAGGAGGTGGAGCTGGGTTGGGTGCCTCCTCCGATCCTGCCACTGATCATCTATTTGCAAGCGCCCCTGTGCCGCCCCATTTCTTACACCCCGCAGCCAGGCCCAATTCCGACCATTTCTTGCCGTTTGTGCCGGTCCCGGCGGCTCTGCAGCATCACCATCACCACCAGCAGCATATGGCAGCGGCAGTGGCCGCCGCCGCCCATCCCCAACTGCAGCAGCAGTATCACAGGCAAGTGGGGCATTTTGGTTCGCCGCCGAATGGGAGCTTCGAGCATACTTTTCTGACAAGGCAGCCTCAGCCGCTTAACAGGATGGGTCAAGCAATGCCGCAAAATCCGGTACCTGGATATGTAGAGGACATGGAATCGGCTAACGCAGCTGGAGGGAGAAAGGTTCTTACTTTATTTCCCACCGGAGATGATTGA 930 0.5602 MKEEDSSWFSRWDEELPSPEDLMPLSQTLITPDLAMAFDIRNPHSNSPHHQIPQPAAPSNPLPSPGNPTQPNSAEFADSAELGSGTAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGAGSGVGGGGAGLGASSDPATDHLFASAPVPPHFLHPAARPNSDHFLPFVPVPAALQHHHHHQQHMAAAVAAAAHPQLQQQYHRQVGHFGSPPNGSFEHTFLTRQPQPLNRMGQAMPQNPVPGYVEDMESANAAGGRKVLTLFPTGDD 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2447 309 MobiDBLite consensus disorder prediction 1 26 - -
Prci3g2447 309 Gene3D - 94 156 - -
Prci3g2447 309 NCBIfam myb-like DNA-binding domain, SHAQKYF class 98 150 IPR006447 GO:0003677
Prci3g2447 309 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 271 IPR044841 GO:0003700|GO:0006355
Prci3g2447 309 MobiDBLite consensus disorder prediction 39 96 - -
Prci3g2447 309 MobiDBLite consensus disorder prediction 1 18 - -
Prci3g2447 309 Pfam Myb-like DNA-binding domain 101 149 IPR001005 -
Prci3g2447 309 MobiDBLite consensus disorder prediction 54 68 - -
Prci3g2447 309 FunFam Two-component response regulator 93 156 - -
Prci3g2447 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 153 IPR017930 -
Prci3g2447 309 SUPERFAMILY Homeodomain-like 94 154 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2447 Prci-Chr3 37577120 37580232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2447 1 309 G2-like Transcription Factor Family AT3G10760 57.341 1.21e-97 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci3g2447 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2447 - - qsa:O6P43_006330 468.003