Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2440 ATGTCGGAGAGAATGAATGTGGGAGGTGTTGAGGACAGAAAGATGAAGCGTAAGCTCGAGGAGGCGGCGGAGAAGCAGGACGAAGAGACCGAACATTTTCTGTCTCTGAGGCTCTTCAACAACGCCGACATGTCGAAACCTTTGAAGGCGGCGGGCCATGGTGGTGGTTTTGTCAGCAAGAAACCAGAGGGAAGGAAGAAGGAGTTTGGGTGCAAGTACTGCATGAAGAAGTTCAAAAGCTCGCAGGCTCTGGGCGGTCACCAGAATGCACACAGGAGAGAGAGAGTGATCTGGAAGATGGAGAAGGAACTCAGTGCTTTCGGACACCCTCATCACTTGTGTCCTTGCTCATCCATTATTGCTAACAATGGTCTTCCTTTAACACCCTCTCGTACTGCTTCGTCGTCTTCTTCTGCTCCTGCTTCACCTTTCATTAATCCGCATTTTCATCGCCACGGGATTAATGGGAGTCACAGTCGCGTGCCAAATTGGACTCATGGCTCTGCTCATCATCAAGGCCAGCCCAAACCCATTTTATCCTTTGGGATGAACACTTCTGGGAATCCAAATGCTGTGGAAAAGAAGCCTGCTGTATCCTCAGGTCTCGACTTATCCCTCAGACTCTGA 627 0.5008 MSERMNVGGVEDRKMKRKLEEAAEKQDEETEHFLSLRLFNNADMSKPLKAAGHGGGFVSKKPEGRKKEFGCKYCMKKFKSSQALGGHQNAHRRERVIWKMEKELSAFGHPHHLCPCSSIIANNGLPLTPSRTASSSSSAPASPFINPHFHRHGINGSHSRVPNWTHGSAHHQGQPKPILSFGMNTSGNPNAVEKKPAVSSGLDLSLRL 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2440 208 SUPERFAMILY beta-beta-alpha zinc fingers 66 97 IPR036236 -
Prci3g2440 208 Pfam C2H2-type zinc finger 69 94 - -
Prci3g2440 208 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 25 135 IPR044246 GO:0009788
Prci3g2440 208 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 96 IPR013087 -
Prci3g2440 208 MobiDBLite consensus disorder prediction 178 193 - -
Prci3g2440 208 MobiDBLite consensus disorder prediction 154 208 - -
Prci3g2440 208 MobiDBLite consensus disorder prediction 1 28 - -
Prci3g2440 208 Gene3D Classic Zinc Finger 52 107 - -
Prci3g2440 208 ProSitePatterns Zinc finger C2H2 type domain signature. 71 91 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2440 Prci-Chr3 37502988 37503614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2440 66 115 C2H2 Transcription Factor Family AT5G25160 55.556 2.30e-13 65.1