Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2404 ATGACCGGTTTGTGGATGCCATTACGCAACTGGGTGGACCAGATAGTGGGGGCGACTCCAAAAGGTGTTCTGAGGGTTATGGGCGTACCTGGACTCACAATTTATCATGTGAAAAGCCATTTACAGAAATACCGCCTTGCAAAGTACCTGCCGGAGTCTTCGGCTGATGAGTCTAAGGATGAGAAAAGGAATTCTGGAGACACTGTATCTGGCACAGATTCTTCCCCGGGATTGCAAATCAGTGATGCTCTGAGGATGCAGATGGAGGTTCAGAAACGTCTCCATGAACAGCTAGAGGTTCAAAAGCAGTTACAAATGAGGATTGAAGCACAGGGTAAATACTTGCAGAAGATCATAGAGGAGCAGCAGAAACTAGGTAATACCTTGAGAGCTTCGGAAACAATACCATCTTCAAAAGACGAGCAAGATCCTTCGCAGTCAGAACCTTCAGGTGATGCCTCAGCAGAGACACAGTCCCCGTTGAAGAAACAGAGAATTAATGATGGCTTCGAGAATGTCATCAGGACCCTCCCAGCTGCCAACAAAGATTGCACAGAAGATTGA 564 0.4681 MTGLWMPLRNWVDQIVGATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESSADESKDEKRNSGDTVSGTDSSPGLQISDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGNTLRASETIPSSKDEQDPSQSEPSGDASAETQSPLKKQRINDGFENVIRTLPAANKDCTED 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2404 187 SUPERFAMILY Homeodomain-like 18 46 IPR009057 -
Prci3g2404 187 MobiDBLite consensus disorder prediction 52 79 - -
Prci3g2404 187 MobiDBLite consensus disorder prediction 128 165 - -
Prci3g2404 187 MobiDBLite consensus disorder prediction 128 187 - -
Prci3g2404 187 MobiDBLite consensus disorder prediction 52 67 - -
Prci3g2404 187 Pfam MYB-CC type transfactor, LHEQLE motif 78 124 IPR025756 -
Prci3g2404 187 NCBIfam myb-like DNA-binding domain, SHAQKYF class 18 47 IPR006447 GO:0003677
Prci3g2404 187 Gene3D - 9 50 - -
Prci3g2404 187 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 18 158 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2404 Prci-Chr3 37317819 37321759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2404 27 168 G2-like Transcription Factor Family AT2G01060 59.859 2.86e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci3g2404 Myb_CC_LHEQLE 5.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2404 - - qsa:O6P43_006271 251.136