Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2403 ATGTATCACGCAAAGAAGTTTCCCCCGGGCACTGTCGTCCCAAATAAAGCTCAAGGTGGTGCTGAGCAGCTTGCAAGTATACCGGATTTGAGTGTACCTGCAGTAAAAAATGCCACACCTGTGGGAGGAAGTGGAAAACAACGATTAAGGTGGACGTCAGATCTTCATGACCGGTTTGTGGATGCCATTACGCAACTGGGTGGACCAGATAGGGCGACTCCAAAAGGTGTTCTGAGGGTTATGGGCGTACCTGGACTCACAATTTATCATGTGAAAAGCCATTTACAGAAATACCGCCTTGCAAAGTACCTGCCGGAGTCTTCGGCTGATGAGTCTAAGGATGAGAAAAGGAATTCTGGAGACACTGTATCTGGCACAGATTCTTCCCCGGGATTGCAAATCAGTGATGCTCTGAGGATGCAGATGGAGGTTCAGAAACGTCTCCATGAACAGCTAGAGGTTCAAAAGCAGTTACAAATGAGGATTGAAGCACAGGGTAAATACTTGCAGAAGATCATAGAGGAGCAGCAGAAACTAGGTAATACCTTGAGAGCTTCGGAAACAATACCATCTTCAAAAGACGAGCAAGATCCTTCGCAGTCAGAACCTTCAGGTGATGCCTCAGCAGAGACACAGTCCCCGTTGAAGAAACAGAGAATTAATGATGGCTTCGAGAATGTCATCAGGACCCTCCCAGCTGCCAACAAAGATTGCACAGAAGATTGA 726 0.4697 MYHAKKFPPGTVVPNKAQGGAEQLASIPDLSVPAVKNATPVGGSGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESSADESKDEKRNSGDTVSGTDSSPGLQISDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGNTLRASETIPSSKDEQDPSQSEPSGDASAETQSPLKKQRINDGFENVIRTLPAANKDCTED 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2403 241 SUPERFAMILY Homeodomain-like 45 100 IPR009057 -
Prci3g2403 241 Gene3D - 45 104 - -
Prci3g2403 241 MobiDBLite consensus disorder prediction 182 219 - -
Prci3g2403 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Prci3g2403 241 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 45 212 IPR044848 GO:0003700
Prci3g2403 241 MobiDBLite consensus disorder prediction 106 133 - -
Prci3g2403 241 Pfam Myb-like DNA-binding domain 49 99 IPR001005 -
Prci3g2403 241 MobiDBLite consensus disorder prediction 182 241 - -
Prci3g2403 241 MobiDBLite consensus disorder prediction 106 121 - -
Prci3g2403 241 FunFam Myb family transcription factor 45 103 - -
Prci3g2403 241 Pfam MYB-CC type transfactor, LHEQLE motif 132 178 IPR025756 -
Prci3g2403 241 NCBIfam myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2403 Prci-Chr3 37317819 37322496 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2403 43 197 G2-like Transcription Factor Family AT4G28610 54.194 5.33e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci3g2403 Myb_DNA-binding 2.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2403 - - qsa:O6P43_006271 349.747