Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2399 ATGGGACCTCAAGGAGGAGCAATCCAAGAGCTAAAGACGGCGTCGTCTTTGGCTCGGCAAGGTTCCTTGTACAATCTGACTCTTGATGAGGTTCAGAACCAGCTTGGAAATTTAGCGAAACCACTAGGGAGTATGAATCTGGACGAGCTGCTCAAGAGTGTGTGGACCGCTGAAGCTGGTCAGGGTCAGGCCTCTGGGTTGGATTCTCCTTCTGGTCAGCTTGCATCAGAGTCGTCCCTGAATCGACAGGGAAGCCTCACGTTATCTGGGGATCTTAGCAAGAAGACTGTTGAAGAGGTTTGGAAAGATATCCTGGAGAAGAAAAGCATTAATCTTGATAGGAAAGCTCAAGGCAGGCAGCCTACACTCGGTGAGATGACCCTAGAGGACTTTCTGTTGAAGGCAGGAGTGGCTGCAGAATCTCTCAATACAAAGAATGATGCTGTCATGTCTGGAGTTGATTCAAATGTGGCTTCCATGCAGAATATGTCACAGCATGCTCATTGGTTGCAATACCAGCTGCCTCCAGTTCAGCAGCCATCCCAGCACCCCCTTCAAAATCAACACAATATAATGGCTGGTTTCATGGCTGGTCCTGCAATTCAACCATCTTTCCCAGTTTCAGTTTTGGATCCAACCTACTCTGAGACCATGGTGAATATGTCACCATCTTCTTTGATGGGTACAATGTCAGATTCACAAGCTTCAGGTCGGAAAAGGTTGGCATCTGGCGATGGGGCTGAAAAAACAGTGGAAAGGAGGCAGAAGAGGATGATTAAAAATAGGGAATCTGCTGCTCGATCACGGGCAAGAAAGCAGGCTTATACAAATGAACTGGAGATTAAAGTTAAGCGTCTAGAAATGGAGAATGAAAGGCTTAGAAGACTCCATATGCAGGAGATGGAGAGGACATTGCCGCGTGCTCCCCCACCTGAGCCTAAGCATCAACTTCGCAGAACGAATTCAGCGTCATTTTGA 978 0.4755 MGPQGGAIQELKTASSLARQGSLYNLTLDEVQNQLGNLAKPLGSMNLDELLKSVWTAEAGQGQASGLDSPSGQLASESSLNRQGSLTLSGDLSKKTVEEVWKDILEKKSINLDRKAQGRQPTLGEMTLEDFLLKAGVAAESLNTKNDAVMSGVDSNVASMQNMSQHAHWLQYQLPPVQQPSQHPLQNQHNIMAGFMAGPAIQPSFPVSVLDPTYSETMVNMSPSSLMGTMSDSQASGRKRLASGDGAEKTVERRQKRMIKNRESAARSRARKQAYTNELEIKVKRLEMENERLRRLHMQEMERTLPRAPPPEPKHQLRRTNSASF 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2399 325 MobiDBLite consensus disorder prediction 227 254 - -
Prci3g2399 325 SUPERFAMILY Leucine zipper domain 253 296 IPR046347 GO:0003700|GO:0006355
Prci3g2399 325 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 251 295 IPR004827 GO:0003700|GO:0006355
Prci3g2399 325 SMART brlzneu 249 307 IPR004827 GO:0003700|GO:0006355
Prci3g2399 325 MobiDBLite consensus disorder prediction 298 325 - -
Prci3g2399 325 Pfam bZIP transcription factor 253 294 IPR004827 GO:0003700|GO:0006355
Prci3g2399 325 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 251 304 - -
Prci3g2399 325 CDD bZIP_plant_BZIP46 253 309 - -
Prci3g2399 325 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 17 323 IPR043452 GO:0003700|GO:0045893
Prci3g2399 325 Coils Coil 276 303 - -
Prci3g2399 325 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 256 271 IPR004827 GO:0003700|GO:0006355
Prci3g2399 325 Gene3D - 251 304 - -
Prci3g2399 325 MobiDBLite consensus disorder prediction 298 314 - -
Prci3g2399 325 MobiDBLite consensus disorder prediction 62 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2399 Prci-Chr3 37305782 37309056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2399 1 325 bZIP Transcription Factor Family AT3G56850 53.799 2.76e-98 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci3g2399 bZIP_1 2.1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2399 K14432 - csav:115716950 371.703