Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2380 ATGAGTTCACGAATCTTCAACAATGGGGGCGACGGTTTCGGTAGGGATGTCAATCTCTTACCTCCGGTTCCTTCTCATGTTTCCCCTCTTCTAGTTCGAACTCCCCAACTTTCTCTGTCAACCACTTTTGGTCAGACTGGTGGCGAGATTGGTTTTCAGATTCTGAGCCTCCTTCAGGGGAACAGGGCAACAATGGGAGGAGGCGGTGAAGCTGTTGAACCTCTCGAGGCTCAAAACGTGAGCTTGCCTTTCAAACTCGGCGAGCAAGACATAGAAGCCAAGAGCTCTTCTGGGTTGAGAAACGGACACGCAAAGCTCTGTGCTAGAGGCCACTGGAGGCCAGCTGAAGACGCCCGACTCAAAGATCTCGTAGCTCAGTACGGTCCTCAAAACTGGAACTTGATCGCCGATCATCTCGAAGGAAGATCAGGTAAAAGTTGCAGACTGAGGTGGTTCAACCAGCTTGATCCTAGAATTAACAGGAGGCCGTTCTCCGAGGAAGAAGAGATGAGACTGTTGTCTGCTCATAGAATGTACGGGAACAAATGGGCCATGATTGCCAAGCTGTTTCCGGGGAGGACAGATAATGCAGTGAAGAACCACTGGCACGTGATAATGGCCAGGAAGCATAGAGAGCAATCAAGCGGTGGCAGGAGGAGGAGATCTTGTTCTGAAATCATTCGTCCAAAGCCTTTAAATTTGACTCTCTCAAATAATGCAGTGAGCGAATCCACCAACTCCGGCAACCTCTTGGATGAATCCGCCTCATCCTCCACCGATCTCTCCCTCAGTCCTACATTTTTTCCTAACCCGAGTTCCCAAGGCCAGGGATCGCTAACAATGGGCCTTTGTCATGAGATGAAGTTGAAGACAACTGGGGACGTGGAATTCGACAAGTATTTTGCGGGTTGGAAGGGATGGAGCGAGGGAGGAGGACAAATGGGGAAGAAGCTGATGGGAGCGGTGGACCTATCAAATTCAGAGTCGAACTCAGAAATCTCAGCATCTGGGTCAGTGCCCACCATTTCTGGGGAAAGCGAGAACGTGGGTGATAACATGAACATGGCATTCATCGATTTCCTTGGGGTAGGAGCTGTATGA 1101 0.5014 MSSRIFNNGGDGFGRDVNLLPPVPSHVSPLLVRTPQLSLSTTFGQTGGEIGFQILSLLQGNRATMGGGGEAVEPLEAQNVSLPFKLGEQDIEAKSSSGLRNGHAKLCARGHWRPAEDARLKDLVAQYGPQNWNLIADHLEGRSGKSCRLRWFNQLDPRINRRPFSEEEEMRLLSAHRMYGNKWAMIAKLFPGRTDNAVKNHWHVIMARKHREQSSGGRRRRSCSEIIRPKPLNLTLSNNAVSESTNSGNLLDESASSSTDLSLSPTFFPNPSSQGQGSLTMGLCHEMKLKTTGDVEFDKYFAGWKGWSEGGGQMGKKLMGAVDLSNSESNSEISASGSVPTISGESENVGDNMNMAFIDFLGVGAV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2380 366 Pfam Myb-like DNA-binding domain 112 172 - -
Prci3g2380 366 MobiDBLite consensus disorder prediction 237 275 - -
Prci3g2380 366 Gene3D - 109 160 - -
Prci3g2380 366 ProSiteProfiles Myb-like domain profile. 109 155 IPR001005 -
Prci3g2380 366 FunFam MYB transcription factor 109 160 - -
Prci3g2380 366 ProSiteProfiles Myb-like domain profile. 156 206 IPR001005 -
Prci3g2380 366 CDD SANT 112 153 IPR001005 -
Prci3g2380 366 SMART sant 108 157 IPR001005 -
Prci3g2380 366 SMART sant 160 208 IPR001005 -
Prci3g2380 366 PANTHER MYB PROTEIN-RELATED 109 252 - -
Prci3g2380 366 CDD SANT 163 203 IPR001005 -
Prci3g2380 366 Gene3D - 163 222 - -
Prci3g2380 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 109 155 IPR017930 -
Prci3g2380 366 SUPERFAMILY Homeodomain-like 109 202 IPR009057 -
Prci3g2380 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 156 210 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2380 Prci-Chr3 37122319 37124816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2380 108 366 MYB Transcription Factor Family AT1G69560 46.565 7.96e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci3g2380 Myb_DNA-bind_6 2.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2380 K09422 - gmx:100791795 318.546