Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2378 ATGGAGGATCTGGGGCAGGATTATGGTTCCGAGAGAAGCCAGAGAGTGACAGGGAGGTCAAGGTGGACTCCCAAGCCGGAGCAAATCCTAATTCTGGAGTCCATCTTCAACAGTGGGACCGTCAATCCCTCCAAGGACGACACTGTCAGAATCAGAAAGCTTCTCGAGAAATTCGGCACCGTCGCCGACGCCAACATCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCGCGCCGCCGCCAGCGCCAGCTGCAGCAGCTAGCCGCCGAAGCCCTCCACCAAGATAATGATCACCAGCTTCAGCCTCATCAGGTTGGCGGTGCAGGTGCAGGTGCAAGTGCAAGTGCAAGCCCAAGTCCGTCACCATCCTATCATCATCACCAGAGCAACCCTGCATCTGATCCTGCAGTTTTGGCGGCTTATAATGGCGGCTGCTCCTCGTCTTATCTCGCTTCCCAAGAACCAATGGATCATGCTCTTTTTTTCCCTGCTGATCACATGGGTTTCCCCGAAATTGATCACAATTCTGATCTGAATTTCCATTCTGTTTCAGGAAGCATCAATGTGTTTATCAATGGGGTTGCAACAGAGGTGGAGAGGGGACCCATAGACATGAAATCAAAGTTTGGTGAAGATGTGATGTTAGTTCATTCGTCTGGAGTTCCAGTTCCTACCAATGACTTTGGCTTCTTATTGCACGATTTGCAGCCTGGTGAAAGCTACTTTCTGGTTTTAAAGGCCGCATAA 747 0.51 MEDLGQDYGSERSQRVTGRSRWTPKPEQILILESIFNSGTVNPSKDDTVRIRKLLEKFGTVADANIFYWFQNRRSRSRRRQRQLQQLAAEALHQDNDHQLQPHQVGGAGAGASASASPSPSPSYHHHQSNPASDPAVLAAYNGGCSSSYLASQEPMDHALFFPADHMGFPEIDHNSDLNFHSVSGSINVFINGVATEVERGPIDMKSKFGEDVMLVHSSGVPVPTNDFGFLLHDLQPGESYFLVLKAA 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2378 248 SMART HOX_1 17 84 IPR001356 GO:0003677
Prci3g2378 248 Gene3D - 19 87 - -
Prci3g2378 248 Pfam Homeodomain 19 79 IPR001356 GO:0003677
Prci3g2378 248 SUPERFAMILY Homeodomain-like 16 86 IPR009057 -
Prci3g2378 248 MobiDBLite consensus disorder prediction 1 22 - -
Prci3g2378 248 MobiDBLite consensus disorder prediction 114 130 - -
Prci3g2378 248 FunFam WUSCHEL-related homeobox 11 19 86 - -
Prci3g2378 248 PANTHER WUSCHEL-RELATED HOMEOBOX 11 13 246 IPR044558 GO:0003700|GO:0048830
Prci3g2378 248 MobiDBLite consensus disorder prediction 99 132 - -
Prci3g2378 248 ProSiteProfiles 'Homeobox' domain profile. 15 80 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2378 Prci-Chr3 37113999 37116117 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2378 19 245 Wox Gene Family AT3G03660 49.603 4.87e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Prci3g2378 Homeodomain 4.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2378 - - qsu:111993094 211.46