Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2359 ATGTTGTGGGTAGATAAGTATCGACCCAAAACCCTCGACCAGATTGTGGTCCACGAAGAAGTCGCCCAAAATCTTAAGAAACTGGTGACGGAGCAGGATTGCCCGCATTTGCTTTTCTATGGCCCGCCAGGGTCTGGCAAAAAAACCCTAATCATGGCTCTTCTCCGACAAATGTTTGGGAACAGTGCCGAGAAGGTGAAGGTGGAAAATAGGACATGGAAAGTGGATGCTGGAAGTAGATCTATTGATATAGAGCTGACAACATTATCAAGTGCCAATCACATAGAAATGAGCCCCAGTGATGCAGGCTTTCAGGACAGATATATTGTTCAAGAAGTAATTAAGGAAATGGCTAAAAATAGACCAATTGATACCAAGGGGAAGAAAGGATTTAAAGTACTAGTGCTCAATGAGGTTGACAAACTCTCTAGAGAAGCTCAGCATTCTCTGCGCAGAACAATGGAGAAATACAGCGCTTATTGCAGGTTAATTCTATGCTGCAATAGTTCTTCAAGAGTTACAGAAGCAATCTGCTCTCGCTGTTTAAATGTGCGAATAAATGCACCAAGTGAAGAGCAGATAGTTAGAGCATTGGAGTTCATTGGAAAGAAAGAAGGGCTGCAACTTCCTTCTGGATTTGCTGCTCGCATAGCAGAGAAATCAAATCGGAACCTAAGGCGGGCCATATTGTCTTTTGAAACTTGCCGTGTCCAACAGTATCCTTTCAGTAGCAAGCAAACAATACCACCAATGGATTGGGAGGAATATATTTCTGAAATTGCATCTGACATAATGAAAGAACAAAGCCCAAAAAGGTTGTTTCAAGTTCGAGGGAAATTGTATGAGCTCTTAATCAACTGTATCCCTCCTGAGATCATCTTGAAGAGGCTTCTTTATGAACTGTTGAAGAAATTGGATGCAGAATTAAAGCTTGAGGTCTGCCATTGGGCGGCTTATTATTCCATATGGGCTTGGAATTAG 981 0.421 MLWVDKYRPKTLDQIVVHEEVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFGNSAEKVKVENRTWKVDAGSRSIDIELTTLSSANHIEMSPSDAGFQDRYIVQEVIKEMAKNRPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAICSRCLNVRINAPSEEQIVRALEFIGKKEGLQLPSGFAARIAEKSNRNLRRAILSFETCRVQQYPFSSKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYELLKKLDAELKLEVCHWAAYYSIWAWN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2359 326 Gene3D - 1 189 IPR027417 -
Prci3g2359 326 Pfam DNA polymerase III, delta subunit 18 188 - -
Prci3g2359 326 CDD AAA 16 190 - -
Prci3g2359 326 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 252 IPR027417 -
Prci3g2359 326 Gene3D - 252 322 - -
Prci3g2359 326 Gene3D - 190 249 - -
Prci3g2359 326 FunFam Replication factor C subunit 5 1 189 - -
Prci3g2359 326 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 3 320 - -
Prci3g2359 326 FunFam replication factor C subunit 3 190 248 - -
Prci3g2359 326 SMART AAA_5 33 187 IPR003593 GO:0016887
Prci3g2359 326 CDD HLD_clamp_RFC 189 257 - -
Prci3g2359 326 SUPERFAMILY post-AAA+ oligomerization domain-like 251 321 IPR008921 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2359 Prci-Chr3 37002018 37005667 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2359 1 320 Core DNA Replication Machinery Family AT5G27740 83.750 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2359 K10756 - gmx:100818329 583.948