Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2348 ATGGCTGACCCTCGGCGCCATCCCATTTCCGCCGCTCGCCACCCTAAACCCTCACCAGCCTCCGCCGCATCCTCCCCTCCCTGTGGCGCCTGCAAGTTCCTCCGCAGGAAGTGCATTGCTGGCTGCATCTTCGCTCCCCACTTTAGCTCCGATCAGGGGTCCGCCCGCTTCGCCGCCGTTCACAAGGTCTTCGGCGCTAGCAATGTCTCTAAGCTCTTGCTTCATATTCCCGTCAACCGCCGCCAAGAAGCAGTGGTTACCATATCCTACGAGGCTCAAGCTCGCTTGTCCGATCCTGTTTATGGCTGTGTTGCCACTATTTTTTCTTTGCAGCAACAGGTGGCATCTCTGCAAGCAGAGCTGGGAATGGTGCAAAGTCAGCTGATGAACAGTAGGTATGCATTAGCAAGTGCTGTACAGAGCTCGCAGCAGCAGCAGCCAAACATGAACATAGGACTCCAGCCAGCGTACTCCAACAATTCATCTGCTTCCACCAATCTCATGATGAACATGAGCAGCAGCTTCAGCCCTTCTGGTTTTGACCTTGCGATGGAGGCCCCACCTTCTTCCCACAGCTTGGACCCTCTTCATTTCTCTCGCTTGTCCAAGGACGAGGAAGACGATGAACAAGAAAGCAGGATTCCCCATGTTTTCAACTATGAGATCCTTCACCCTTAA 678 0.5413 MADPRRHPISAARHPKPSPASAASSPPCGACKFLRRKCIAGCIFAPHFSSDQGSARFAAVHKVFGASNVSKLLLHIPVNRRQEAVVTISYEAQARLSDPVYGCVATIFSLQQQVASLQAELGMVQSQLMNSRYALASAVQSSQQQQPNMNIGLQPAYSNNSSASTNLMMNMSSSFSPSGFDLAMEAPPSSHSLDPLHFSRLSKDEEDDEQESRIPHVFNYEILHP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2348 225 ProSiteProfiles LOB domain profile. 26 128 IPR004883 -
Prci3g2348 225 MobiDBLite consensus disorder prediction 1 26 - -
Prci3g2348 225 PANTHER LOB DOMAIN CONTAINING PROTEIN 24 191 - -
Prci3g2348 225 Pfam Lateral organ boundaries (LOB) domain 27 125 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2348 Prci-Chr3 36959349 36960700 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2348 2 212 AS2 family AT3G03760 56.780 2.90e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci3g2348 LOB 5.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2348 - - qsa:O6P43_006215 291.582