Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2329 ATGGCCATGATTCTCCTCCTCCTCCCCCCTCTGACTTTTGCTGCTCCCAATGCACCATTTGTGAGACAAACGGTGACTGTAAGCAAAGACGGGAGAGGGAACTTCACCACCATCCAGCAAGCTATTTCTGCAGCTCCGAGCAACACTCTCTCCACGGACGGGCATTTCTTGATCCGCGTCTCTGCAGGTATCTATGAAGAATACATCTCTATTGATAAGAAAAAGACTTATTTGATGATGATAGGAGACGGCATCAACAAAACTATCATCACAGGCAATCACAATGACGATGACGGGTGGAAAACCTTCAACTCTGCAACTTTCGGCGTGAAAGGGGATGGATTCGTGGGAGTGAATATCATTTTTCGCAACACAGCAGGGCCGGAAAAGCACCAAGCAGTCGCAGCTCTAAACTCAGCAAACATGTCCTCATTTTATAGCTGCAGTTTTGAGGGATACCAGGACACGCTATACGCACATTCGAAGATGCAGCTGTACAGAGAATGTGATATATACGGCACGATCGATTTCATCTTCGGGAATGCGGCGGCGGTGTTCCAAAACTGCAACATTTATGCTCGTAGGCCTATGAGGGGATTAGGGGCTTTTCATCTTCGGGAATGCGGCGGCGGTGTTCCAAAACTGCAACATTTACGCTCGTAG 663 0.4811 MAMILLLLPPLTFAAPNAPFVRQTVTVSKDGRGNFTTIQQAISAAPSNTLSTDGHFLIRVSAGIYEEYISIDKKKTYLMMIGDGINKTIITGNHNDDDGWKTFNSATFGVKGDGFVGVNIIFRNTAGPEKHQAVAALNSANMSSFYSCSFEGYQDTLYAHSKMQLYRECDIYGTIDFIFGNAAAVFQNCNIYARRPMRGLGAFHLRECGGGVPKLQHLRS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2329 220 SUPERFAMILY Pectin lyase-like 21 197 IPR011050 -
Prci3g2329 220 Gene3D - 19 205 IPR012334 -
Prci3g2329 220 Pfam Pectinesterase 25 198 IPR000070 GO:0030599|GO:0042545
Prci3g2329 220 ProSitePatterns Pectinesterase signature 2. 171 180 IPR033131 -
Prci3g2329 220 FunFam Putative pectinesterase 57 21 213 - -
Prci3g2329 220 PANTHER PECTINESTERASE 24 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2329 Prci-Chr3 36821934 36822690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2329 20 197 Carbohydrate Esterase AT1G02810 67.978 1.03e-84 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2329 K01051 - pcin:129305578 442.965