Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2328 ATGGGTTCGGACCCCAGAAAAATAGGTGCATGGTTCTTGTATGAACCCAATATTTTGACTCCAACTGGTAAATTAAGTCTCAGACCCGGCTCGCATGACTATGTCATGAACGATGTTACCACCACCACGGTTACATCCTATGAAGATTCTCTTGAAATTCCCATGAGTTCTCAGCCATGGATCGATGTTGGGATGACTTTTGGTATCTATGAAGAATACATCTCTATTGATAAGAAAAAGACTTATTTGATGATGATAGGAGACGGCATCAACAAAACTATCATCACAGGCAATCACAATGACGATGACGGGTGGAAAACCTTCAACTCTGCAACTTTCGGCGTGAAAGGGGATGGATTCGTGGGAGTGAATATCATTTTTCGCAACACAGCAGGGCCGGAAAAGCACCAAGCAGTCGCAGCTCTAAACTCAGCAAACATGTCCTCATTTTATAGCTGCAGTTTTGAGGGATACCAGGACACGCTATACGCACATTCGAAGATGCAGCTGTAA 513 0.4366 MGSDPRKIGAWFLYEPNILTPTGKLSLRPGSHDYVMNDVTTTTVTSYEDSLEIPMSSQPWIDVGMTFGIYEEYISIDKKKTYLMMIGDGINKTIITGNHNDDDGWKTFNSATFGVKGDGFVGVNIIFRNTAGPEKHQAVAALNSANMSSFYSCSFEGYQDTLYAHSKMQL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2328 170 Pfam Pectinesterase 42 169 IPR000070 GO:0030599|GO:0042545
Prci3g2328 170 Gene3D - 31 170 IPR012334 -
Prci3g2328 170 PANTHER PECTINESTERASE 66 169 - -
Prci3g2328 170 SUPERFAMILY Pectin lyase-like 66 167 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2328 Prci-Chr3 36821176 36821887 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2328 65 170 Carbohydrate Esterase AT1G02810 68.868 1.71e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2328 K01051 - pcin:129305577 354.755