Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2306 ATGCCAGAGTTGAGAAGTGGAGCTAGAAGATCAAAGCGGCTTGGTGATCTTCAGCCTGCCCCACAACCTATTGAAGAGAATTTGGCGCAAACTGCTCCAAACAAGACCAGAAGGAGAGTTGGAGGTGGAAGAGGAAGAGGCGGGAATGCTCCAGCTGTAGCAAAAGGAACTTCACCAGCAGTACCCACAAGGCGAACTGCAGCTGGTAGGGGCCGGGGAGGTAGATTGGTTGATCTTATTCCTGAACCTGTTGCACCTGGGGCCCCTGAACCTGTTCTTAATCGTGAAGAGGTAGCAGCAAATAATAATATTTTGATGGCGGGGGGAAGTGCAGACAAGGTGGTAGGAGCTGAAGAGGAGGCATGCGCAACCCCTGTTCCTGAAACGGTACAAGTTGGTGGTTCTCCTTTATATAAGATAGAAACGAAGTTGGGCAAGGGTGGTTTTGGCCAAGTGTATGTTGGTAGAAGAGTAAGTGGTGGCTCTGATCGTACAGGTCCTGACGCAACGGAGGTTGCACTGAAGTTTGAACACAGAAATAGTAAAGGCTGCAATTATGGGCCTCCTTATGAGTGGCAAGTCTACAATACTCTGAATGGTTGTTATGGCATTCCATGGGTTCATTACAAGGGCCGCCAAGGAGAATTCTATATCCTGGTCATGGACATGCTTGGGCCCAGTCTTTGGGATGTATGGAATTCTGTTGGCCAGGCGATGTCACCAAATATGGTTGCATGCATTGCAGTGGAGGCAATATCAATTCTTGAGAAGCTCCATATGAAAGGGTTTGTGCATGGAGATGTTAAACCAGAGAACTTTTTACTTGGTCAACCTGGATCACCTGATGAGAAGAAGTTATATCTTATTGATCTTGGTTTGGCATCTAAATGGAAGGACACATCTGGTCAACATGTTGAATATGATCAGAGGCCTGATGTATTTAGGGGAACCATAAGATATGCCAGTGTTCATGCACATTTAGGTAGGACTGGAAGTAGGAGGGACGATCTTGAGTCCCTTGCATACACGTTAATATTTCTTATAAGGGGGAGGTTACCTTGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTCTGTAAGAAAAAGATGGGCACTTCTCCAGAGTTGATGTGCTGCTTTTGTCCTGCTCCATTCAAGCAGTTCCTTGAAGCTGTTACTAACATGAGATTTGATGAGGAGCCCAACTATTCCAAGCTTATATCATTATTTGATAGCTTAATTGAACCATCTTCTCTATTGAGACCAATCAGAATTGATGGAGCTTTAAAGGTTGGACAAAAAAGGGCTAGAATGCTTATAAATCGAGAAGACGAGCAGCCAAAGAAGAAAGTGCGATTGGGGAATCCTGCTACTCAGTGGATATCAGTGTATAATGCACGGCGTCCCATGAAACAGAGGTATCACTATAATGTATCAGACAGTAGGCTTCGACAGCATGTGGACAAGGGTAATGAGGATGGATTATATATCAGCTGTGTTGCATCCTCATCAAATCTTTGGGCCCTAACCATGGATGCAGGAACGGGTTTCTCCTCTCAGGTCTATGAGTTGTCACCGGTCTTCCTGCATAAGGATTGGATTATGGAACAATGGGAGAAAAATTACTATATTAGTTCTATAGCTGGTGCAACAAATGGGAGTTCCTTGGTTGTCATGTCCAAAGGAACTCCATACACCCAGCAGTCCTACAAAGTAAGTGAATCATTTCCTTTCAAATGGATAAATAAGAAGTGGAAAGAAGGATTCCATGTTACCTCCATGACCACTGCTGGCAGTCGATGGGGCGTTGTCATGTCGAGGAATGCAGGATATTCTGATCAGGTTGTGGAGCTTGACTTCTTATACCCCAGTGAAGGTATTCATCGGCGATGGGAGAGTGGTTACCGGATAACATCTATGGCTGCTACTGCTGATCAGGCAGCCTTCATTCTTAGCATACCAAAACGCAAATTGCTTGATGAAACTCAAGAGACTCTACGTACCTCTGCCTTCCCTAGCACCCATGTGAAGGAAAAATGGACCAAGAATCTCTATATCGCCTCAATATGTTATGGGCGGACTGTTTGTTAG 2094 0.4494 MPELRSGARRSKRLGDLQPAPQPIEENLAQTAPNKTRRRVGGGRGRGGNAPAVAKGTSPAVPTRRTAAGRGRGGRLVDLIPEPVAPGAPEPVLNREEVAANNNILMAGGSADKVVGAEEEACATPVPETVQVGGSPLYKIETKLGKGGFGQVYVGRRVSGGSDRTGPDATEVALKFEHRNSKGCNYGPPYEWQVYNTLNGCYGIPWVHYKGRQGEFYILVMDMLGPSLWDVWNSVGQAMSPNMVACIAVEAISILEKLHMKGFVHGDVKPENFLLGQPGSPDEKKLYLIDLGLASKWKDTSGQHVEYDQRPDVFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIRGRLPWQGYQGDNKSFLVCKKKMGTSPELMCCFCPAPFKQFLEAVTNMRFDEEPNYSKLISLFDSLIEPSSLLRPIRIDGALKVGQKRARMLINLXEDEQPKKKVRLGNPATQWISVYNARRPMKQRYHYNVSDSRLRQHVDKGNEDGLYISCVASSSNLWALTMDAGTGFSSQVYELSPVFLHKDWIMEQWEKNYYISSIAGATNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWESGYRITSMAATADQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWTKNLYIASICYGRTVC 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2306 698 ProSiteProfiles Protein kinase domain profile. 138 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2306 698 PANTHER CASEIN KINASE-RELATED 139 662 - -
Prci3g2306 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Prci3g2306 698 Pfam Protein kinase domain 138 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2306 698 MobiDBLite consensus disorder prediction 1 90 - -
Prci3g2306 698 ProSitePatterns Protein kinases ATP-binding region signature. 144 175 IPR017441 GO:0005524
Prci3g2306 698 SUPERFAMILY Protein kinase-like (PK-like) 138 425 IPR011009 -
Prci3g2306 698 Gene3D Transferase(Phosphotransferase) domain 1 110 455 - -
Prci3g2306 698 SMART serkin_6 138 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2306 698 FunFam Casein kinase 1-like protein 110 457 - -
Prci3g2306 698 CDD STKc_CK1 138 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2306 Prci-Chr3 36666273 36672927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2306 224 411 MAP Kinase Kinase Kinase AT3G27560 23.469 3.69e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Prci3g2306 Pkinase 3.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2306 - - gmx:100801967 1258.43