Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2265 ATGGAAGAGCCGGTCGTGGTGAACAGAGGGGAAGATCAGCCTCTGGATTTGCCCCCGGGGTTCAGATTCCACCCCACGGATGAGGAGGTCATTACTTATTATCTGACCGAGAAGGTGCTGAATAGCAGTTTCAGTGCAACTGCCATCGGAGAGGCCGATTTGAACAAGTGCGAGCCTTGGGACTTGCCCAAGAAAGCCAAGATGGGGGAGAAAGAGTGGTACTTCTTCTGCCAAAGGGATAGGAAGTATCCCACGGGCATGAGGACAAATCGAGCCACCGAGTCTGGATACTGGAAGGCTACTGGAAAAGATAAAGAGATTTACAAAGGGAAAGGCAACCTCGTCGGGATGAAGAAGACCCTCGTCTTCTACCGAGGGAGAGCTCCCAAGGGAGAGAAAACCAACTGGGTTATGCACGAGTTCAGATTGGAAGGCAAATTCGCCACTTATAATCTCCCCAAGGCTGCCAAGGATGAATGGGTTGTAAGCAAGGTTTTCCACAAGAACTCGGATGTTAAAAAGAACCCAATTCAAGGCCTTTTGAGGATCAACTCTCTTGGTGATGATTTGCTTGACTGTTCCTCACTTCCGCCTCTCATGGATCCTCCTTTCAAGCCCGCCTACAGCGACGGTGCCGTCAAGGGGACCAACCCATCCCCACCTATGTCATCATCCAAACCGCCCGACGGCTATTACGTTCCCAACCTCTCCATCATCAACAATCAGCCGCAACAACTGATTATGAAGCCTCAGGCTATGATGGTGCCCGCCAATAACAATTACACCGTCAATCCAGCCAATTCCAACTTCAGTGACTCGCTCTCGCATCCTCAGTTTCAAATCCAAAATCCCAGCTTCTTTTCCCAGCAGAATCATCCGGGTTATGTGAGTAATGATCAGCAGCAGACGTTTCTGAGAGCATTTGCGGCGAACAACAACAACGGCTTATTTGGGTTGGACAAGCTCTGCAAGATGGAGCCTTTGGTGTCGTCTGGCAATCAATCTGTGGTGAGCGTGTCGCAGGATACGGGCCTCAGCAACGACAGAAACACCGACACTTCCTCGGCCGTTTCCAAGCTCGACATGGGAAAGAACAAGGCATTATACGAGGATCTTGAGGCTCCATCGGCTGGGCCCCTTTCTGAGTTGGAATACCTGTGGGACTACTGA 1170 0.5077 MEEPVVVNRGEDQPLDLPPGFRFHPTDEEVITYYLTEKVLNSSFSATAIGEADLNKCEPWDLPKKAKMGEKEWYFFCQRDRKYPTGMRTNRATESGYWKATGKDKEIYKGKGNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGKFATYNLPKAAKDEWVVSKVFHKNSDVKKNPIQGLLRINSLGDDLLDCSSLPPLMDPPFKPAYSDGAVKGTNPSPPMSSSKPPDGYYVPNLSIINNQPQQLIMKPQAMMVPANNNYTVNPANSNFSDSLSHPQFQIQNPSFFSQQNHPGYVSNDQQQTFLRAFAANNNNGLFGLDKLCKMEPLVSSGNQSVVSVSQDTGLSNDRNTDTSSAVSKLDMGKNKALYEDLEAPSAGPLSELEYLWDY 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2265 389 MobiDBLite consensus disorder prediction 339 358 - -
Prci3g2265 389 Gene3D NAC domain 26 173 IPR036093 GO:0003677|GO:0006355
Prci3g2265 389 ProSiteProfiles NAC domain profile. 17 168 IPR003441 GO:0003677|GO:0006355
Prci3g2265 389 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 290 - -
Prci3g2265 389 FunFam NAC domain-containing protein 100-like 26 172 - -
Prci3g2265 389 SUPERFAMILY NAC domain 15 169 IPR036093 GO:0003677|GO:0006355
Prci3g2265 389 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2265 Prci-Chr3 36511146 36513226 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2265 1 372 NAC Transcription Factor Family AT5G18270 51.531 2.18e-116 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci3g2265 NAM 4.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2265 - - aprc:113861501 474.937