Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2263 ATGGGTAGCCCGCAGTCCAATTTACCTCCGGGCTTTAGATTCCACCCTACCGATGAGGAGCTCGTTCTTCACTATCTCAGCAAGAAGGTAGCCTCTCTGCCCTTGCCAGTCTCCATCATTGCCGAGGTTGATATCTACAAGTTCGATCCCTGGGACTTACCGGAGAAGGCAGCGTTTGGGGATAAGGAATGGTACTTTTTCAGTCCTCGAGACCGCAAGTACCCGAACGGGGCGAGGCCAAACAGGGCAGCTGCTTCAGGGTACTGGAAGGCGACAGGGACTGATAAGACCATAGTGGTGTCGTTGCCGGGAGGAGGAACGGCGGAGAGCATGGGGGTGAAGAAGGCTCTGGTGTTCTACACCGGAAGACCCCCCAAGGGCGTCAAGACTAACTGGATCATGCACGAGTATCGTCTCCTCGACAACACCAGAAACAAACCCATCAAGTTCCAAGACTCTTCCATGAGGCTTGATGACTGGGTTCTTTGCCGAATTTACAAGAAGTCCAAGTATGCTGAATCTCCCACTGCAGAAACAGAAACCTTGACGGCCGACCAAGATCTAGCTGAAGAGCATATTGTGTTATTACCAGGCTCTCAGTCTCCCCCTTCTCATCAAAACACTCTGACTTCTCAGAAATCATTGTCTTTCTCGAACCTGTTAGATGCCACGGACTTCTCCATGTTGAGCAGCTTATTATCTGACAACTATTCGACCCCGCCTGGGTTTGAATCAGTTCCTGCCGCGAATTCGAACTCTGAAATTCTCAATCCGGATCAACAATCATACCAAAACACTAATACCAACAACAGCTGCTACCTCCAGAAAACCCTCCATTTGAACCCCTCCGTCCAAAACATGGAAAACAACACGCGCAAGCGTCAGATTTCTAGCATAGATGAGGATTTCTCGTACCCATCAAAGAAGTACCTGAGCTCTTCCTGCAGCTTCCCTAATAACAGCACGACCCAGCTCCAGAACCCACAATGGAACTTCCTCCTCAAGCAGTCGTTGTTGAACCAGCAGTTACTGCTGGGTCCTCATCTTGGCTTTCAGGGATAA 1062 0.5 MGSPQSNLPPGFRFHPTDEELVLHYLSKKVASLPLPVSIIAEVDIYKFDPWDLPEKAAFGDKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVVSLPGGGTAESMGVKKALVFYTGRPPKGVKTNWIMHEYRLLDNTRNKPIKFQDSSMRLDDWVLCRIYKKSKYAESPTAETETLTADQDLAEEHIVLLPGSQSPPSHQNTLTSQKSLSFSNLLDATDFSMLSSLLSDNYSTPPGFESVPAANSNSEILNPDQQSYQNTNTNNSCYLQKTLHLNPSVQNMENNTRKRQISSIDEDFSYPSKKYLSSSCSFPNNSTTQLQNPQWNFLLKQSLLNQQLLLGPHLGFQG 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2263 353 Pfam No apical meristem (NAM) protein 9 139 IPR003441 GO:0003677|GO:0006355
Prci3g2263 353 Gene3D NAC domain 17 173 IPR036093 GO:0003677|GO:0006355
Prci3g2263 353 SUPERFAMILY NAC domain 4 168 IPR036093 GO:0003677|GO:0006355
Prci3g2263 353 ProSiteProfiles NAC domain profile. 8 168 IPR003441 GO:0003677|GO:0006355
Prci3g2263 353 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 282 - -
Prci3g2263 353 FunFam NAC transcription factor 56 17 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2263 Prci-Chr3 36482984 36484702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2263 4 353 NAC Transcription Factor Family AT3G04070 50.000 1.83e-100 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci3g2263 NAM 1.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2263 - - vun:114194335 476.092