Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2223 ATGATGAACCCATTTTCGTCGTCGTCGTCCAAGGCCAAAAAGAAGCAAACGGCGACAACAAGCACAGCTACAGCAATGGCAACAACACAAGAGCAAAAACATGAAGCGGCATGGGGAGGGAGGTACCTGGGTGTCCGGAGGAGGCCATGGGGAAGATACGCCGCGGAGATCCGAGACCCTTCTACCAAAGAGAGGCATTGGCTCGGCACCTTCGACACTGCTGAAGAAGCCGCGTTGGCTTACGACAGAGCAGCTCGGTCCATGCGCGGCTCACGAGCCCGAACCAACTTCGTCTACTCCGATACGCCCCCCGGTTCTTCTGTCACCTCCATTATCTCCCCTGACGAAGAAACCCACCAGAACCACGACTTCTCGTCTTTCTTCGACCAAAACTCGCTCACCCAACAATCCTACGCGAATCCTCAACTCGCCGACGGTTTCATCGCGTTTTCGGATAGTAACAATTGGTCTTCACTTTCAACTGAGGCTTATAATTATCCACAACATCAAGTTGAAACAGTGGAGGGTCATAACCTAACACATTTCCAACAACTGTATGATGATAGTAACACTGAGCTTCCTCCATTGCCACCAGATATTACGAGCTCAGCGGGATACGAAATGGGCAATGGGTTTAGCGGTAACGAATTCGGATACTCGGAGCAGAGCACCGTGACGGAAACAAGCGGGGGATCGTACCCGTACTTGGGTTTCGATACGATTGATTACGTGCATAGCCCGATGTTCAGCACAATGCCACCGGTGTCAGAGAAGGAGCCGGAGTGCTTCGACTTGGGGAATTCGTCTTATTTCTTTAGAGGTTGA 825 0.5152 MMNPFSSSSSKAKKKQTATTSTATAMATTQEQKHEAAWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSRARTNFVYSDTPPGSSVTSIISPDEETHQNHDFSSFFDQNSLTQQSYANPQLADGFIAFSDSNNWSSLSTEAYNYPQHQVETVEGHNLTHFQQLYDDSNTELPPLPPDITSSAGYEMGNGFSGNEFGYSEQSTVTETSGGSYPYLGFDTIDYVHSPMFSTMPPVSEKEPECFDLGNSSYFFRG 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2223 274 PRINTS Ethylene responsive element binding protein signature 64 80 IPR001471 GO:0003700|GO:0006355
Prci3g2223 274 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Prci3g2223 274 MobiDBLite consensus disorder prediction 1 31 - -
Prci3g2223 274 MobiDBLite consensus disorder prediction 1 36 - -
Prci3g2223 274 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 18 159 - -
Prci3g2223 274 CDD AP2 41 97 IPR001471 GO:0003700|GO:0006355
Prci3g2223 274 ProSiteProfiles AP2/ERF domain profile. 41 98 IPR001471 GO:0003700|GO:0006355
Prci3g2223 274 SMART rav1_2 41 104 IPR001471 GO:0003700|GO:0006355
Prci3g2223 274 Gene3D AP2/ERF domain 40 99 IPR036955 GO:0003700|GO:0006355
Prci3g2223 274 Pfam AP2 domain 42 90 IPR001471 GO:0003700|GO:0006355
Prci3g2223 274 FunFam Ethylene-responsive transcription factor 2 41 99 - -
Prci3g2223 274 SUPERFAMILY DNA-binding domain 41 99 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2223 Prci-Chr3 36171989 36173293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2223 27 264 AP2-EREBP Transcription Factor Family AT5G13910 43.600 1.64e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci3g2223 AP2 1.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2223 K09286 - gmx:100809600 278.1