Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2199 ATGGGGGCTCAATCGTTGAACCGTACTAGTCCGAATCAGAGTCCGATCGCTAACAGTGAGCTGGGTGCTGGAATGGGTCGTCGTCATTCCGTGGTTTCGACCCCTAGGCGTAATATTATACCGAATGGTCATAAATGTGACAAGACTGAAGAACCAAATGGTTCAAAAAATTCGTCAATTCAGAGAAGAACCAGTCCTCGAATCCAAGCCAAGCATAAAGTGGACATGGAACCTCCCGTGTGCCGCAGAGATGAGCTGCCCCATAAAACTAGTGATGCGAAGATGAGCGCCTGTAAAACAAGTGTTAAGTGCGAAAATGCTGATAAGCAACAAACAGTGGGAGGACCAAAGAGAACTAAAAATTTGGATAATTCAACAACTGTGGAACCACTAGAGTTTAAGAAGTCTTTAATACAGAGAAGAACTAGCCCCCGAATCCGAGCCAAACAAAAGGTGGATAAGGCACTTGCAGTGCAGTTGTCCGGTGACCGAGACAATGCTAGTGATGTGAAGAAGAATACAGCCTGCAAAAGAAGTCGCAATGACGAAAATGTGTGTGAGGAAAATGTTGTGGAGGACCAACAGAAAGCTAAAAAGTTGAACGAGTCAATTACTGAAGAGCCAAATGATGACAATGAATCGTCAGGTCAAAGGATGGCTAACTCTCGAGTTCAAAATAAGGAATTTCTAGTGCGACGTAGAGTAGAATTGTTAGAGGACCGAGATAAGGCTGGTAATGATAAGAAAAGTAAATGTTTCAAAAGAAGTTGCAATGATGAAAATGGGGATGAACATGGGGATAAGGAAGGGGGAGTAGGTAAGCCACCTAGAGTAAAGAAGCTTAAAGAGGCCACCGTGGTTCATAACAAACAGACATCTGCGGGTTCAAAAGCAAATGGGGCAGGGAATTTGGCAGATAAAAGTGACTTTGTCAGGGTGAAGGAAACGCTGAGGTTGTTTAACAAGCATTATCTTCATTTTGTTCAGGAGGAGGAGAATAGGTGCAACAAAGTGGCCTCTTCCCTCAAAGTGTCTAAAAGAGGTTCAAAATCTAAGAAAAATGCAACAATTGAAGTTGAAAAGACAATGGCTAAGCGACCTGATTTGAAAGCATTATCCAAGATGATGGAAAACAAGGAGACATTGTATCCTGAGAAAAGAATTGGTGATATTCCAGGTATTAAGGTTGGACATCAATTCTATTCGCGTGCTGAAATGGTTGCTGTTGGGTTTCATAGCCATTGGCTAAATGGCATAGATTATATGGGTCAAGCTTATTCCAAAGTGTCACAGTACAGTCACTATGAATTTCCACTTGCTGTGGCCATTGTTTTGTCGGGGATGTATGAGGATGATCTTGATAATGCTGAGGATGTTGTATATACTGGTCAAGGTGGGCATAATTTGACTGGTGATAAGCGTCAAATTCGGGATCAGGTGTTAGAGCGTGGTAATCTGGCTCTGAAGAACTGCATGGAGCAATGTGTGTCTGTAAGGGTGGTTCGCGGACATGAATCTTCAAACAGTTACAGCGGCAAAGTTTACACATATGATGGCTTGTATAAGGTTGTTAACTATTGGGCAGAAAAAGGAATATCTGGGTTTACGGTCTTTAAGTTTCGGCTCAGGAGGCTTGATGGGCAGCCAACCTTGACAACTAAGCAGGTGTATTTCATTAATGGACGTGCCCCTCAGTCCATTGCTGAAATACGAGGGCTTGTGTGTGAGGACATCACCAAAGGTGAAGAAGATGTGCCTATTCCTGCCACTAACCTGATTGACGACCCCCCAGTTGCACCCAAAGGTTTTAAATATAAAAAATCAATTTCGCTTTCAAAGAATGTAAAGCTCCCCCCTGCTGTCACTGGATGCAAGTGCAAAGGCTTATGTGTGGATCCCACATCCTGTGAATGTGCTTTACGAAATGGCTCTGATTTTCCCTATGTATCTCGTAATGGAGGGAGGTTAATTGAAGCCAAAGATGTTGTCTTTGAATGTGGACCAAATTGTGGATGTGGTCCTGGTTGTGTTAATAGAACTTCTCAGAGAGGGCCACGATATCGTCTTGAGGTTTTTCGAACTGCAAAGAAAGGATGGGCTGTTAGATCTTGGGATTTCATACCTTCGGGAGCACCAGTTTGTGAATACACAGGATTAATCAGGAGGACAGAAGATGTAGAGAATACACTCGAGAACAATTATATTTTTGAGATAGATTGTTTGCAAACGATGAAGGGCATTGGTGGAAGAGAGAGGCGATCACAAAATGAAACATCTGCAGCAGTTAAACTTTTGGACAACTATGCAAATGATGCCTCTGAATCCGCACCAGAATTTTGTATTGATGCTGGATCAATTGGAAATATTGCTCGATTTATAAACCATAGTTGTGAACCAAATTTATTTGTTCAATGTGTTTTGAGTTCACACCATGATTTAAGGCTTGCACGAGTGATGTTATTTGCTGCAGACAACATACCACCTTTGCAGGAGCTTACATATGACTATGGTTATGCCCTGGATAGTGTCTTGAGCCCTGACGGGAAAGTAAAGAAAATGACGTGTTATTGTGGAGCTGCTGACTGCAGGAAGCGACTGTTCTAA 2604 0.4255 MGAQSLNRTSPNQSPIANSELGAGMGRRHSVVSTPRRNIIPNGHKCDKTEEPNGSKNSSIQRRTSPRIQAKHKVDMEPPVCRRDELPHKTSDAKMSACKTSVKCENADKQQTVGGPKRTKNLDNSTTVEPLEFKKSLIQRRTSPRIRAKQKVDKALAVQLSGDRDNASDVKKNTACKRSRNDENVCEENVVEDQQKAKKLNESITEEPNDDNESSGQRMANSRVQNKEFLVRRRVELLEDRDKAGNDKKSKCFKRSCNDENGDEHGDKEGGVGKPPRVKKLKEATVVHNKQTSAGSKANGAGNLADKSDFVRVKETLRLFNKHYLHFVQEEENRCNKVASSLKVSKRGSKSKKNATIEVEKTMAKRPDLKALSKMMENKETLYPEKRIGDIPGIKVGHQFYSRAEMVAVGFHSHWLNGIDYMGQAYSKVSQYSHYEFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKRQIRDQVLERGNLALKNCMEQCVSVRVVRGHESSNSYSGKVYTYDGLYKVVNYWAEKGISGFTVFKFRLRRLDGQPTLTTKQVYFINGRAPQSIAEIRGLVCEDITKGEEDVPIPATNLIDDPPVAPKGFKYKKSISLSKNVKLPPAVTGCKCKGLCVDPTSCECALRNGSDFPYVSRNGGRLIEAKDVVFECGPNCGCGPGCVNRTSQRGPRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGLIRRTEDVENTLENNYIFEIDCLQTMKGIGGRERRSQNETSAAVKLLDNYANDASESAPEFCIDAGSIGNIARFINHSCEPNLFVQCVLSSHHDLRLARVMLFAADNIPPLQELTYDYGYALDSVLSPDGKVKKMTCYCGAADCRKRLF 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2199 867 Pfam SAD/SRA domain 388 548 IPR003105 -
Prci3g2199 867 MobiDBLite consensus disorder prediction 256 276 - -
Prci3g2199 867 Gene3D - 372 560 IPR036987 -
Prci3g2199 867 SMART G9a_1 384 548 IPR003105 -
Prci3g2199 867 MobiDBLite consensus disorder prediction 191 223 - -
Prci3g2199 867 MobiDBLite consensus disorder prediction 1 19 - -
Prci3g2199 867 MobiDBLite consensus disorder prediction 1 127 - -
Prci3g2199 867 Pfam Pre-SET motif 578 679 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci3g2199 867 ProSiteProfiles SET domain profile. 687 837 IPR001214 GO:0005515
Prci3g2199 867 SMART PostSET_3 851 867 IPR003616 -
Prci3g2199 867 ProSiteProfiles Post-SET domain profile. 851 867 IPR003616 -
Prci3g2199 867 SUPERFAMILY PUA domain-like 371 557 IPR015947 -
Prci3g2199 867 SMART preset_2 575 671 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci3g2199 867 ProSiteProfiles Pre-SET domain profile. 622 684 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci3g2199 867 MobiDBLite consensus disorder prediction 103 127 - -
Prci3g2199 867 Pfam SET domain 698 837 IPR001214 GO:0005515
Prci3g2199 867 SMART set_7 687 843 IPR001214 GO:0005515
Prci3g2199 867 MobiDBLite consensus disorder prediction 191 206 - -
Prci3g2199 867 MobiDBLite consensus disorder prediction 68 92 - -
Prci3g2199 867 ProSiteProfiles YDG domain profile. 389 544 IPR003105 -
Prci3g2199 867 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 168 860 - -
Prci3g2199 867 SUPERFAMILY SET domain 572 844 IPR046341 -
Prci3g2199 867 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 214 867 IPR025794 GO:0016571
Prci3g2199 867 Gene3D SET domain 568 867 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2199 Prci-Chr3 35979937 35994169 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2199 375 867 EF-hand Containing Proteins AT5G13960 66.465 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci3g2199 SAD_SRA 1.7e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2199 K11420 - qsa:O6P43_006101 959.518