Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2198 ATGGGGGCTCAATCGTTGAACCGTACTAGTCCGAATCAGAGTCCGATCGCTAACAGTGAGCTGGGTGCTGGAATGGGTCGTCGTCATTCCGTGGTTTCGACCCCTAGGCGTAATATTATACCGAATGGTCATAAATGTGACAAGACTGAAGAACCAAATGGTTCAAAAAATTCGTCAATTCAGAGAAGAACCAGTCCTCGAATCCAAGCCAAGCATAAAGTGGACATGGAACCTCCCGTGTGCCGCAGAGATGAGCTGCCCCATAAAACTAGTGATGCGAAGATGAGCGCCTGTAAAACAAGTGTTAAGTGCGAAAATGCTGATAAGCAACAAACAGTGGGAGGACCAAAGAGAACTAAAAATTTGGATAATTCAACAACTGTGGAACCACTAGAGTTTAAGAAGTCTTTAATACAGAGAAGAACTAGCCCCCGAATCCGAGCCAAACAAAAGGTGGATAAGGCACTTGCAGTGCAGTTGTCCGGTGACCGAGACAATGCTAGTGATGTGAAGAAGAATACAGCCTGCAAAAGAAGTCGCAATGACGAAAATGTGTGTGAGGAAAATGTTGTGGAGGACCAACAGAAAGCTAAAAAGTTGAACGAGTCAATTACTGAAGAGCCAAATGATGACAATGAATCGTCAGGTCAAAGGATGGCTAACTCTCGAGTTCAAAATAAGGAATTTCTAGTGCGACGTAGAGTAGAATTGTTAGAGGACCGAGATAAGGCTGGTAATGATAAGAAAAGTAAATGTTTCAAAAGAAGTTGCAATGATGAAAATGGGGATGAACATGGGGATAAGGAAGGGGGAGTAGGTAAGCCACCTAGAGTAAAGAAGCTTAAAGAGGCCACCGTGGTTCATAACAAACAGACATCTGCGGGTTCAAAAGCAAATGGGGCAGGGAATTTGGCAGATAAAAGTGACTTTGTCAGGGTGAAGGAAACGCTGAGGTTGTTTAACAAGCATTATCTTCATTTTGTTCAGGAGGAGGAGAATAGGTGCAACAAAGTGGCCTCTTCCCTCAAAGTGTCTAAAAGAGGTTCAAAATCTAAGAAAAATGCAACAATTGAAGTTGAAAAGACAATGGCTAAGCGACCTGATTTGAAAGCATTATCCAAGATGATGGAAAACAAGGAGACATTGTATCCTGAGAAAAGAATTGGTGATATTCCAGGTATTAAGGTTGGACATCAATTCTATTCGCGTGCTGAAATGGTTGCTGTTGGGTTTCATAGCCATTGGCTAAATGGCATAGATTATATGGGTCAAGCTTATTCCAAAGTGTACAGTCACTATGAATTTCCACTTGCTGTGGCCATTGTTTTGTCGGGGATGTATGAGGATGATCTTGATAATGCTGAGGATGTTGTATATACTGGTCAAGGTGGGCATAATTTGACTGGTGATAAGCGTCAAATTCGGGATCAGGTGTTAGAGCGTGGTAATCTGGCTCTGAAGAACTGCATGGAGCAATGTGTGTCTGTAAGGGTGGTTCGCGGACATGAATCTTCAAACAGTTACAGCGGCAAAGTTTACACATATGATGGCTTGTATAAGGTTGTTAACTATTGGGCAGAAAAAGGAATATCTGGGTTTACGGTCTTTAAGTTTCGGCTCAGGAGGCTTGATGGGCAGCCAACCTTGACAACTAAGCAGGTGTATTTCATTAATGGACGTGCCCCTCAGTCCATTGCTGAAATACGAGGGCTTGTGTGTGAGGACATCACCAAAGGTGAAGAAGATGTGCCTATTCCTGCCACTAACCTGATTGACGACCCCCCAGTTGCACCCAAAGGTTTTAAATATAAAAAATCAATTTCGCTTTCAAAGAATGTAAAGCTCCCCCCTGCTGTCACTGGATGCAAGTGCAAAGGCTTATGTGTGGATCCCACATCCTGTGAATGTGCTTTACGAAATGGCTCTGATTTTCCCTATGTATCTCGTAATGGAGGGAGGTTAATTGAAGCCAAAGATGTTGTCTTTGAATGTGGACCAAATTGTGGATGTGGTCCTGGTTGTGTTAATAGAACTTCTCAGAGAGGGCCACGATATCGTCTTGAGGTTTTTCGAACTGCAAAGAAAGGATGGGCTGTTAGATCTTGGGATTTCATACCTTCGGGAGCACCAGTTTGTGAATACACAGGATTAATCAGGAGGACAGAAGATGTAGAGAATACACTCGAGAACAATTATATTTTTGAGATAGATTGTTTGCAAACGATGAAGGGCATTGGTGGAAGAGAGAGGCGATCACAAAATGAAACATCTGCAGCAGTTAAACTTTTGGACAACTATGCAAATGATGCCTCTGAATCCGCACCAGAATTTTGTATTGATGCTGGATCAATTGGAAATATTGCTCGATTTATAAACCATAGTTGTGAACCAAATTTATTTGTTCAATGTGTTTTGAGTTCACACCATGATTTAAGGCTTGCACGAGTGATGTTATTTGCTGCAGACAACATACCACCTTTGCAGGAGCTTACATATGACTATGGTTATGCCCTGGATAGTGTCTTGAGCCCTGACGGGAAAGTAAAGAAAATGACGTGTTATTGTGGAGCTGCTGACTGCAGGAAGCGACTGTTCTAA 2598 0.4253 MGAQSLNRTSPNQSPIANSELGAGMGRRHSVVSTPRRNIIPNGHKCDKTEEPNGSKNSSIQRRTSPRIQAKHKVDMEPPVCRRDELPHKTSDAKMSACKTSVKCENADKQQTVGGPKRTKNLDNSTTVEPLEFKKSLIQRRTSPRIRAKQKVDKALAVQLSGDRDNASDVKKNTACKRSRNDENVCEENVVEDQQKAKKLNESITEEPNDDNESSGQRMANSRVQNKEFLVRRRVELLEDRDKAGNDKKSKCFKRSCNDENGDEHGDKEGGVGKPPRVKKLKEATVVHNKQTSAGSKANGAGNLADKSDFVRVKETLRLFNKHYLHFVQEEENRCNKVASSLKVSKRGSKSKKNATIEVEKTMAKRPDLKALSKMMENKETLYPEKRIGDIPGIKVGHQFYSRAEMVAVGFHSHWLNGIDYMGQAYSKVYSHYEFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKRQIRDQVLERGNLALKNCMEQCVSVRVVRGHESSNSYSGKVYTYDGLYKVVNYWAEKGISGFTVFKFRLRRLDGQPTLTTKQVYFINGRAPQSIAEIRGLVCEDITKGEEDVPIPATNLIDDPPVAPKGFKYKKSISLSKNVKLPPAVTGCKCKGLCVDPTSCECALRNGSDFPYVSRNGGRLIEAKDVVFECGPNCGCGPGCVNRTSQRGPRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGLIRRTEDVENTLENNYIFEIDCLQTMKGIGGRERRSQNETSAAVKLLDNYANDASESAPEFCIDAGSIGNIARFINHSCEPNLFVQCVLSSHHDLRLARVMLFAADNIPPLQELTYDYGYALDSVLSPDGKVKKMTCYCGAADCRKRLF 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2198 865 MobiDBLite consensus disorder prediction 256 276 - -
Prci3g2198 865 ProSiteProfiles SET domain profile. 685 835 IPR001214 GO:0005515
Prci3g2198 865 MobiDBLite consensus disorder prediction 1 19 - -
Prci3g2198 865 MobiDBLite consensus disorder prediction 1 127 - -
Prci3g2198 865 ProSiteProfiles Pre-SET domain profile. 620 682 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci3g2198 865 ProSiteProfiles Post-SET domain profile. 849 865 IPR003616 -
Prci3g2198 865 Gene3D - 372 558 IPR036987 -
Prci3g2198 865 MobiDBLite consensus disorder prediction 190 223 - -
Prci3g2198 865 ProSiteProfiles YDG domain profile. 389 542 IPR003105 -
Prci3g2198 865 SMART preset_2 573 669 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci3g2198 865 SMART G9a_1 384 546 IPR003105 -
Prci3g2198 865 MobiDBLite consensus disorder prediction 190 206 - -
Prci3g2198 865 Pfam Pre-SET motif 576 677 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci3g2198 865 MobiDBLite consensus disorder prediction 103 127 - -
Prci3g2198 865 SMART set_7 685 841 IPR001214 GO:0005515
Prci3g2198 865 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 214 865 IPR025794 GO:0016571
Prci3g2198 865 Pfam SET domain 696 835 IPR001214 GO:0005515
Prci3g2198 865 Pfam SAD/SRA domain 388 546 IPR003105 -
Prci3g2198 865 Gene3D SET domain 566 865 IPR046341 -
Prci3g2198 865 MobiDBLite consensus disorder prediction 68 92 - -
Prci3g2198 865 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 167 858 - -
Prci3g2198 865 SUPERFAMILY SET domain 570 842 IPR046341 -
Prci3g2198 865 SMART PostSET_3 849 865 IPR003616 -
Prci3g2198 865 SUPERFAMILY PUA domain-like 371 555 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2198 Prci-Chr3 35979931 35994168 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2198 375 865 EF-hand Containing Proteins AT5G13960 66.734 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci3g2198 SAD_SRA 1e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2198 K11420 - qsa:O6P43_006101 953.355