Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2169 ATGGAGATTCTTCCCAGCTTTGTCATCACTGGAGGCATTAAACTGCCTATCGGCTACAGGTTCTGCCCGACTGATGAGGAGCTTATCGTCCACTATCTCAGGAAGTTGGCCTTTGGCCTGCCATTACCTGCCGCAGTGATTCCTGTTCTCGACGTGTTTCAGACCGATCCCTGGAAGCTTCCAGGCGTGGGAGAATTAGATTCTGTTGAAAAGGGGTATTTTTTCAGCGAGATGAAGGACATTTTCTATGGAGGAATCATCGTGATTGCTGAGGGCACTGGCTTCTGGAAGCCCACTGGCAAAGAGAAATTAATTGTTTCTTCTGCTACCAACTATGTGGTCGGGACGAGGAGAACCCTGGTTTTCTGCGGAGGCGACGGTTCCGGCGAGGCCCAAACACAATGGGTCATGCATGAGCTGCGCCTCGCCGGCCCTCCAATTATCGGTCACCCATCCAAGATGCCGTGGACAAAGTGGGCTGTGTATCGGGTTTTTCAGAAGGAGAAGAAGCCCAAGAGAAAAAGGTCTGCGAAGCAGTCCAATATCAAAAAAGTTCAGAAGCTTGAGGGGGTCGAACCCAGCTTCATTGATTTCACCGCTGACGATCATGGTTCTGACGAAGCCCCGCCGCCGCCGCCGTCCCCGAGTGTCAGTGAAGGCAGTGACACCATCGCTTCTAACTAG 684 0.5219 MEILPSFVITGGIKLPIGYRFCPTDEELIVHYLRKLAFGLPLPAAVIPVLDVFQTDPWKLPGVGELDSVEKGYFFSEMKDIFYGGIIVIAEGTGFWKPTGKEKLIVSSATNYVVGTRRTLVFCGGDGSGEAQTQWVMHELRLAGPPIIGHPSKMPWTKWAVYRVFQKEKKPKRKRSAKQSNIKKVQKLEGVEPSFIDFTADDHGSDEAPPPPPSPSVSEGSDTIASN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2169 227 Gene3D NAC domain 24 172 IPR036093 GO:0003677|GO:0006355
Prci3g2169 227 PANTHER NAC TRANSCRIPTION FACTOR 56 15 181 - -
Prci3g2169 227 SUPERFAMILY NAC domain 8 167 IPR036093 GO:0003677|GO:0006355
Prci3g2169 227 ProSiteProfiles NAC domain profile. 15 167 IPR003441 GO:0003677|GO:0006355
Prci3g2169 227 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Prci3g2169 227 MobiDBLite consensus disorder prediction 193 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2169 Prci-Chr3 35669223 35670800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2169 7 169 NAC Transcription Factor Family AT5G13180 40.000 4.37e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci3g2169 NAM 1.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2169 - - pcin:129298153 453.366