Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2152 ATGGATCCCAAGGGCTCAAAAAAGCCAGATGAGGCGCCCAACAACAAGTTCTTGAGTCTCCCACGGCCACAATCCAACATGGGGGAGAACAATAAAGGGCCGGCCGAAGTGAGGGATTTCCAGATTTCCATTGCAGAAAAAGAAGAAAACAGCAAGAACAAGCAGCTAGCCCCCAAGAGAGCTTCCAACAAAGATAGACACACCAAGGTGGAAGGCAGAGGCAGAAGAATTAGGATGCCTGCACTGTGTGCGGCTAGAATCTTTCAGCTGACCAGAGAATTGGGTCACAAATCTGATGGAGAAACCATTCAGTGGCTCCTCCAGCAGGCGGAGCCGTCGATAGTCGCAGCCACCGGAACCGGGACGATACCGGCATCTGCTTTAGCCGCAGCTGGGGGCTCTGTTTCGCAAGAGGGGACCTCTCTATCTGCAGGATTGCACCCAAAAATGGATGAATTAGGGGGGTCCAATATAGGGTCAGGCAGTAGGACCAGCTGGGCAATGGTTGGTGGGAATTTGGGGAGACCCCATGTGGCCACAGGTCTATGGCCTTCTGTCAGTGGATTTGGGTTTCAGTCATCATCATCTTCTGGTCCATCTGCACCTAGTTTAGGGTCTGAGAGTTCAAATTACCTACAAAAGATTGGGTTCCCTGTCTTTGACTTGCCTGCAGCATCAGCCACAAACATGGGTCCTATGAATTTTGCCTCAATCTTGGGTGGGAGTAGTAACCAGCAGATTCCTGGTTTGGAGCTGGGGCTGTCTCAAGATGGTCCCATAGGGATTTTGAACCCACAAGCCTTGACCCAGATTTACCAGCAGATGGGTCAAGCTAGAGTTCACCTACAGCAGCATCAGCATCCTCCTGCTGAGGATGATTCTCAATGTTCTGCAGGGCAGTAG 903 0.5127 MDPKGSKKPDEAPNNKFLSLPRPQSNMGENNKGPAEVRDFQISIAEKEENSKNKQLAPKRASNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIVAATGTGTIPASALAAAGGSVSQEGTSLSAGLHPKMDELGGSNIGSGSRTSWAMVGGNLGRPHVATGLWPSVSGFGFQSSSSSGPSAPSLGSESSNYLQKIGFPVFDLPAASATNMGPMNFASILGGSSNQQIPGLELGLSQDGPIGILNPQALTQIYQQMGQARVHLQQHQHPPAEDDSQCSAGQ 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2152 300 ProSiteProfiles TCP domain profile. 63 117 IPR017887 -
Prci3g2152 300 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 31 192 IPR005333 GO:0003700
Prci3g2152 300 MobiDBLite consensus disorder prediction 41 72 - -
Prci3g2152 300 Pfam TCP family transcription factor 62 147 IPR017887 -
Prci3g2152 300 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2152 Prci-Chr3 35480588 35482777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2152 1 272 TCP Transcription Factor Family AT3G27010 55.822 3.52e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Prci3g2152 TCP 2.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2152 - - cave:132180810 417.927