Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2145 ATGGAGAATTATACCGTGTTGTTTCCTGGTCCTGCTTCTTCTTCTTCAGGCTTTCAAATGCCAGCTAGTGCCATGGGAGGCTCTTATCATGGATTTAGTAATTTTGAGGGCCAAATCTCGAACGGGTTTCTGGGTTTGAGGCCTAGTCATGATCAGAGCCTCGGTGATTTGCAGAAAAGAGGAGAGGTGAGAGATGGGCAGTTATCTCAGAGTGGAAATGGGAAGGATGATCAGATTGGAGGAGGTACAGGGAAAAAGAAAGGAGAGAAGAAGGTTAGAAAGCCTAGATTTGCTTTCCAAACTCGGAGCCAGGTTGACATTCTTGATGATGGCTACAGGTGGAGAAAATACGGCCAGAAAGCTGTTAAAAACAACAAATTCCCCAGGAGCTACTACAGATGTACTCATCAAGGATGCAATGTGAAGAAGCAAGTGCAACGTCTAACGAAAGACGAAGGGGTAGTGGTGACGACATACGAAGGCGTGCACACGCATCCAATTGAGAAGACAACGGACAACTTTGAGCACATTTTAAGTCAGATGCATATATATACTCCTTTTTAA 564 0.445 MENYTVLFPGPASSSSGFQMPASAMGGSYHGFSNFEGQISNGFLGLRPSHDQSLGDLQKRGEVRDGQLSQSGNGKDDQIGGGTGKKKGEKKVRKPRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMHIYTPF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2145 187 SUPERFAMILY WRKY DNA-binding domain 100 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g2145 187 ProSiteProfiles WRKY domain profile. 103 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g2145 187 FunFam WRKY transcription factor 57 94 168 - -
Prci3g2145 187 Pfam WRKY DNA -binding domain 109 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g2145 187 MobiDBLite consensus disorder prediction 61 96 - -
Prci3g2145 187 SMART WRKY_cls 108 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g2145 187 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 65 170 IPR044810 GO:0003700
Prci3g2145 187 Gene3D WRKY domain 85 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2145 Prci-Chr3 35435313 35437342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2145 96 187 WRKY Transcription Factor Family AT5G13080 85.870 1.88e-57 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci3g2145 WRKY 1.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2145 - - ccaj:109792402 263.848