Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2112 ATGGGGGATAATACCAGCAATCTTGAAGAAACAGTCATAAATCACAGCCATGAAGGGGAAGTTGAAGGAGAAGAGAGAGACCCAGAAAGCAATCCCCTGAATGAGCCACTGCTCAAGAGGAATCGCACACTTTCCTCCAATCCACTTGCTTTGGTTGGAGCCAAAGTTTCCTACATAGAAAGCTTGGACTATGAGATAAATGAGAATGATCTGTTCAAGCATGATTGGAGGAGCAGATCGAAAGTTCAAGTTTTGCAGTACGTATTCTGTAAATGGACACTGGCTTTCCTTGTTGGACTTCTTACAGGACTTGTGGCCACCTTCATCAATCTTTCAATTGAGAACATTGCAGGTTACAAGATTCTCGCTGTTGTCAAATTCATCGAAAATGACAGGTATTTAGCGGGCTTCCTGTATTTCACAGGCATGAATTTCCTATTAACATTCGTTGCTGCTGTTCTGTGTGTGTGCCTTGCACCCACAGCAGCTGGACCTGGTATACCTGAAATTAAAGCTTATCTTAATGGCGTCGATACTCCCGACATGTACGGTGCCATGACATTGATCGTCAAGATAATTGGAAGCATTGGAGCTGTAGCTGCAGGGCTGGATTTAGGAAAAGAAGGACCGTTGGTGCATATTGGGGCCTGTATAGCCTCCTTACTGGGCCAAGGAGGCACAGAGAAATACCGGATCAAATGGAGATGGCTTCGATATTTCAATAATGATCGAGACCGTCGGGATCTCATTACATGTGGAGCTTCCTCAGGGGTTTGTGCAGCATTCCGGGCCCCAGTTGGAGGAGTCCTGTTTTCTCTAGAAGAGGTGGCAACCTGGTGGAGAAGTGCTCTCCTCTGGAGGACCTTTTTCAGCACAGCTGTGGTGGCCGTAGTTCTCAGGGCCTTCATTGAGATTTGCAACTCTGGGAAATGTGGCCTCTTTGGCACAGGAGGGCTGGTCATGTTTGACGTCAGCAATGTCACTGTGAGATACCATGTCATGGATATCATCCCTGTTGTTCTCATTGGCATCATTGGTGGGGTACTGGGTAGCCTCTATAACCATCTTCTTCACAAGGTACTCAGAGTCTACAGTCTCATCAATCAGAAGGGGAAAATGCAGAAGCTCCTCCTCAGTCTATCAGTTGCACTATTCACATCAGTGTGCCAATATTGTCTTCCATTCTTCACAAGATGCATTCCCTGTGATCCATCACTTCCAGAAAATGCCTGCCCCACAAATGGACGATCTGGAAATTTTAAACAATTCAATTGCCCCACTGGCCAATACAATGAGCTTGCTACGTTGTTGCTCACCACTAATGATGATGCTGTTCGAAACATATTCTCAACCAACACTCCTCATGAGTATCATCCATCTTCGCTCCTGATTTTCTTCGCACTCTATTGCATATTAGGACTGATTACTTTTGGGATTGCTGTTCCATCTGGGCTCTTCCTCCCAATCATCCTCATGGGTTCAGGTTATGGCCGTCTTCTTGGCCTCTTGATGGGACCTCACACAAAAATTGACCAGGGGCTGTTTGCTGTCCTGGGTGCAGCCTCCCTCATGGCAGGTTCAATGAGAATGACAGTATCAGTTTGTGTGATCTTCCTTGAACTCACCAACAATCTTCTGCTACTACCCATTACAATGCTTGTTCTCCTAATAGCAAAGACTGTCGGAGACAGTTTCAACCCTAGCATCTACGAAATTATACTGCAATTAAAAGGCCTTCCTTTCTTGGACGCAAATCCTGAGCCATGGATGAGGAATCTCACAGTGGGTGAGCTTGTTGATGTGAAGCCACCGGCAATCACCCTAAATGGAGTAGAGAAGGTAGACCGTATAGTGGAAGTCCTTAAAAACACTACACATAATGGATTCCCTGTGGTGGATGAAGCAGGGGAAGCTTCAACAGGAATTGCCAAGCTTCATGGACTGATCCTAAGAGCACACCTGGTGAAAGCGCTGAAAAAGAAATGGTTCCTGACGGAAAGAAGGAGAACAGAGGAATGGGAAGTGAGAGAGAAATTTACGTGGGTGGATCTGACAGACAGAGAAGGGAATATTGAGGAGGTCGCTGTGACGAGGAAGGAAATGGACATGTTTGTTGATCTACATCCTTTCACCAATACGACTCCTTCGACGGTTCTGGAGAGCACATCGGTGGCAAAAGCGATGGTCCTCTTCAGACAACTAGCACTTCGCCATTTGCTTGTGTTGCCCGATTATCAAGAATCCGGGGTATCTCCTGTAATTGGCATCTTGACCAGGCAGGATCTACTAGCCCACAACATTCTTACAGTCTTTCCTAACCTGAAAAAAATGTGA 2334 0.4602 MGDNTSNLEETVINHSHEGEVEGEERDPESNPLNEPLLKRNRTLSSNPLALVGAKVSYIESLDYEINENDLFKHDWRSRSKVQVLQYVFCKWTLAFLVGLLTGLVATFINLSIENIAGYKILAVVKFIENDRYLAGFLYFTGMNFLLTFVAAVLCVCLAPTAAGPGIPEIKAYLNGVDTPDMYGAMTLIVKIIGSIGAVAAGLDLGKEGPLVHIGACIASLLGQGGTEKYRIKWRWLRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAVVAVVLRAFIEICNSGKCGLFGTGGLVMFDVSNVTVRYHVMDIIPVVLIGIIGGVLGSLYNHLLHKVLRVYSLINQKGKMQKLLLSLSVALFTSVCQYCLPFFTRCIPCDPSLPENACPTNGRSGNFKQFNCPTGQYNELATLLLTTNDDAVRNIFSTNTPHEYHPSSLLIFFALYCILGLITFGIAVPSGLFLPIILMGSGYGRLLGLLMGPHTKIDQGLFAVLGAASLMAGSMRMTVSVCVIFLELTNNLLLLPITMLVLLIAKTVGDSFNPSIYEIILQLKGLPFLDANPEPWMRNLTVGELVDVKPPAITLNGVEKVDRIVEVLKNTTHNGFPVVDEAGEASTGIAKLHGLILRAHLVKALKKKWFLTERRRTEEWEVREKFTWVDLTDREGNIEEVAVTRKEMDMFVDLHPFTNTTPSTVLESTSVAKAMVLFRQLALRHLLVLPDYQESGVSPVIGILTRQDLLAHNILTVFPNLKKM 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2112 777 SMART cbs_1 604 659 IPR000644 -
Prci3g2112 777 SMART cbs_1 714 767 IPR000644 -
Prci3g2112 777 FunFam Chloride channel ClC3 83 399 - -
Prci3g2112 777 SUPERFAMILY Clc chloride channel 69 584 IPR014743 -
Prci3g2112 777 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 25 768 - -
Prci3g2112 777 Pfam CBS domain 715 763 IPR000644 -
Prci3g2112 777 Pfam CBS domain 602 659 IPR000644 -
Prci3g2112 777 Pfam Voltage gated chloride channel 148 562 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Prci3g2112 777 ProSiteProfiles CBS domain profile. 601 666 IPR000644 -
Prci3g2112 777 Gene3D - 586 772 IPR046342 -
Prci3g2112 777 CDD CBS_pair_voltage-gated_CLC_euk_bac 602 765 - -
Prci3g2112 777 SUPERFAMILY CBS-domain pair 586 764 IPR046342 -
Prci3g2112 777 PRINTS Chloride channel signature 531 550 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Prci3g2112 777 PRINTS Chloride channel signature 160 177 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Prci3g2112 777 PRINTS Chloride channel signature 481 501 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Prci3g2112 777 PRINTS Chloride channel signature 191 210 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Prci3g2112 777 PRINTS Chloride channel signature 255 274 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Prci3g2112 777 PRINTS Chloride channel signature 569 583 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Prci3g2112 777 PRINTS Chloride channel signature 513 529 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Prci3g2112 777 CDD ClC_6_like 60 582 - -
Prci3g2112 777 PRINTS Plant CLC chloride channel signature 308 315 IPR002251 GO:0005247|GO:0006821|GO:0016020
Prci3g2112 777 PRINTS Plant CLC chloride channel signature 433 449 IPR002251 GO:0005247|GO:0006821|GO:0016020
Prci3g2112 777 PRINTS Plant CLC chloride channel signature 276 284 IPR002251 GO:0005247|GO:0006821|GO:0016020
Prci3g2112 777 PRINTS Plant CLC chloride channel signature 65 73 IPR002251 GO:0005247|GO:0006821|GO:0016020
Prci3g2112 777 PRINTS Plant CLC chloride channel signature 290 300 IPR002251 GO:0005247|GO:0006821|GO:0016020
Prci3g2112 777 MobiDBLite consensus disorder prediction 13 33 - -
Prci3g2112 777 MobiDBLite consensus disorder prediction 1 36 - -
Prci3g2112 777 Gene3D Clc chloride channel 83 584 - -
Prci3g2112 777 ProSiteProfiles CBS domain profile. 711 776 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2112 Prci-Chr3 35214963 35219142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2112 8 776 Ion Channels AT3G27170 76.326 0.0 1204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2112 K05016 - gmx:100788620 1263.44