Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2111 ATGCCGGAGGAGACCACATCGATCGACTATGTCATGGAGGCTGCCTCCGGGCCCCACTTCTCGGGCCTCCGCCTTGACGGTCTCCTCTCTTCTCCGCCTTCTTCTTCTGCTTCTTCACCTGCTCATCGATTTACTTCCGCTGCCGCTTCTGCTCTGGATTCAACCCTACCCTGTGATTCTACTCCCGCACGGCCCTTCGTTATCGGTGTTTCGGGAGGTACAGCTTCAGGGAAGACCACTGTTTGTGACATGATAATCCAACAGCTACACGATCACCGCGTTGTGCTAGTCAATCAGGATTCGTTTTATCGTGGTTTGACGCCTGAAGAATCGGAACGTGCACACGAGTATAATTTTGATCATCCTGATGCTTTTGACACTGAACAACTATTAGAATGCATGCAAGAACTCATAAGTGGCCACTCAGTTCAAGTCCCAATTTATGACTTCAAGAAGCACCAGCGCTCTTCAGATAGTTTTCGGCAGGTCAATGCTTCTGATGTCATTATTTTGGAGGGAATTCTTGTGTTCCATGACCAACGTGTTCGTGATTTGATGAACATGAAAATCTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATTCGACGTGATACAGTGGAGAGGGGTAGGGATATAAACTCTGTTCTTGAACAGTATGCAAAGTTTGTCAAGCCTGCCTTTGATGATTTTGTTCTTCCATCAAAGAAATATGCTGATGTGATCATCCCCCGTGGTGGTGATAATCATGTTGCCATTGATCTGATTGTCCAGCATATACATACAAAACTTGGTCAACATGATCTATGCAAAATATATCCGAATGTGTATGTCATCCAGTCAACGTTCCAGATAAGGGGGATGCACACATTGATTCGTGACAAAGATATATCAAAGCATGACTTTGTATTTTATTCAGACCGACTCATACGTCTGGTTGTTGAGCATGGCCTTGGCCATTTGCCTTTCACTGAAAAGCAAGTGGTTACTCCAACAGGATCTGTCTATACTGGTGTTGACTTCTGCAAAAAGTTGTGCGGTGTTTCTATTGTCCGAAGTGGTGAAAGCATGGAGAATGCTCTACGAGCATGTTGCAAAGGCATAAAAATTGGAAAGATTCTGATCCACAGAGATGGAGATTATGGCAAGCAGCTTATATATGAGAAGCTTCCCAAGGACATATCAGAACGGCATGTCTTGCTTCTTGACCCTGTCCTAGCTACTGGTAACTCTGCAAACCAAGCAATTGAGCTGCTCATACAGAAGGGAGTTCCAGAATCTTACATAATATTCCTAAATCTCATTTCTGCACCGGAGGGAATCCATTGTGTGTGTAAAAGGTTTCCATCCTTGAAAATTGTCACATCCGAGATTGATGTTGCCTTGAATGAAGAGTTCCGTGTTATCCCAGGATTGGGTGAGTTTGGTGATCGTTACTTCGGAACTGACGATTAA 1461 0.4449 MPEETTSIDYVMEAASGPHFSGLRLDGLLSSPPSSSASSPAHRFTSAAASALDSTLPCDSTPARPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPEESERAHEYNFDHPDAFDTEQLLECMQELISGHSVQVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQRVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDKDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDYGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESYIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2111 486 PANTHER URIDINE KINASE 60 395 - -
Prci3g2111 486 Gene3D - 62 268 IPR027417 -
Prci3g2111 486 PRINTS Uridine kinase signature 140 155 - -
Prci3g2111 486 PRINTS Uridine kinase signature 197 207 - -
Prci3g2111 486 PRINTS Uridine kinase signature 65 82 - -
Prci3g2111 486 PRINTS Uridine kinase signature 211 222 - -
Prci3g2111 486 PRINTS Uridine kinase signature 233 246 - -
Prci3g2111 486 PRINTS Uridine kinase signature 95 106 - -
Prci3g2111 486 FunFam Uridine kinase 62 268 - -
Prci3g2111 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 258 IPR027417 -
Prci3g2111 486 Gene3D - 269 484 IPR029057 -
Prci3g2111 486 SUPERFAMILY PRTase-like 268 485 IPR029057 -
Prci3g2111 486 CDD PRTases_typeI 342 457 IPR000836 -
Prci3g2111 486 Pfam Phosphoribulokinase / Uridine kinase family 67 253 IPR006083 GO:0005524|GO:0016301
Prci3g2111 486 FunFam Uridine kinase 269 484 - -
Prci3g2111 486 NCBIfam uridine kinase 66 265 IPR000764 -
Prci3g2111 486 CDD UMPK 67 265 IPR000764 -
Prci3g2111 486 Pfam Uracil phosphoribosyltransferase 283 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2111 Prci-Chr3 35208895 35214690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2111 1 486 PRT Gene Family AT5G40870 86.008 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2111 K00876 - qsa:O6P43_008817 862.062