Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2107 GCTTTTCACTCGAGAATCAATCGGTTCGTGATTTCAGAAGCGACCGGGTTTTGTGCAGATAAAGAGTCCCTCTCACAGTTTCATCCTCTGTCACCCTGTGATCTTGATGTTAAACTCAGATTGCTGATCCCATTGAGATATTCCTGCTTATTTTTTCCTATTCTTGCTTCTCTAGCCAAACCATGTATTAGTCCACTCGAGAAATCAAACATGTGGAACACTGAACTCTGTCTTAGTTTAGCTGGGGTTATACTTGGAATTTGCATTGCTTTTGCAGCAGCTTTCCTTGTAATCAGATTGAAGAACAAAACGGAAGAGAATGGGATTGGGAAAGGAGACTTGGAGCTTCAGCATCTCAACCTCAGTGTAAGAACAACCTGCGACAAGAAGGTTTCTTTTGAGGGATCTCCTGACACTCTCAAAGGGAAAATTATTGAAACCACACCACGCAAGATGCTCCTGGAGACTTACACTGTTGAAGAGTTAAGGAAAGCAACTGAGGAGTTCAGTTCAACTAATCAAATTGAGGGATCTGTGTTTCATGGCCGTATCAATGGGAAGAGCACGGCAATCAAGCGCACAAACAGAGAGACATTGACAAAGATGGATTTTGGACTCTTCAATGAAGCGCTTCACCACCACCCCAACATCCTTAAACTGCTTGGCACGTGCTCGACGGAGGGTCCTGAATCGTATCTTGTTTTCGAATTTGCAGAAAACGGGTCTTTGAAAGACTGGCTTCACAGTGGGCTGGCCATCAAGAACCAGTTCATTGCTTCCTGCTATTGTTTCCTTTCATGGAGCCAGCGACTAAGGATCTGCCTTGACGTGGCCATGGCTTTGCAGTATATGCACCACGTGATGAACCCAAGCTACGTGCATAGAAATTTGAAGAGCAGAAACATATTTCTAGACGAAGAATTTGGTGCCAAGATGGGAAATTTTGGGATGGCAGGTTGTGTTGAGAATGACCCTGAAGACCCACTTTTGTATTCAACCAATCCTGCCTCTTGGAGCCGAGGCTACTTGGCCCCTGAATACGTGCACCAAGGTACAATTTCCCCAAGCATTGATATTTTTGCTTATGGGGTAGTTTTGCTGGAGATACTATCAGGTCGACCACCCATAAGCAGGCCCGATGAGAAAGGAGAAGGAAGCATTTGGCTCACGGAGAAAATCAAGTCCGTGTTGAAGTCAGAGAATGTGGATGAGCTAAAGGAGTGGATGGACAGTGCATTGGGTGAGAATTACTCTTTCGATGCAGCTATCTCAGTGGCAAAACTTGCAAGATCTTGCGTAGAGGAAGACTCCTCTCTGAGGCCGAGTGCTGGGGAAGTTGTTGAGAAGCTATCGAGATTGGTTGAGGAACTACCTGAAGAAGAGGACCACTTCTTCTTGTCTGAAAGCTCAACCAAACCTCTGGTCAAGACGCCTATAAACAATCAGTGCAACGTGTTAAAGAAGCCAAGCGAGTAA 1476 0.4526 AFHSRINRFVISEATGFCADKESLSQFHPLSPCDLDVKLRLLIPLRYSCLFFPILASLAKPCISPLEKSNMWNTELCLSLAGVILGICIAFAAAFLVIRLKNKTEENGIGKGDLELQHLNLSVRTTCDKKVSFEGSPDTLKGKIIETTPRKMLLETYTVEELRKATEEFSSTNQIEGSVFHGRINGKSTAIKRTNRETLTKMDFGLFNEALHHHPNILKLLGTCSTEGPESYLVFEFAENGSLKDWLHSGLAIKNQFIASCYCFLSWSQRLRICLDVAMALQYMHHVMNPSYVHRNLKSRNIFLDEEFGAKMGNFGMAGCVENDPEDPLLYSTNPASWSRGYLAPEYVHQGTISPSIDIFAYGVVLLEILSGRPPISRPDEKGEGSIWLTEKIKSVLKSENVDELKEWMDSALGENYSFDAAISVAKLARSCVEEDSSLRPSAGEVVEKLSRLVEELPEEEDHFFLSESSTKPLVKTPINNQCNVLKKPSE 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2107 491 Gene3D Phosphorylase Kinase; domain 1 144 237 - -
Prci3g2107 491 Gene3D Transferase(Phosphotransferase) domain 1 238 470 - -
Prci3g2107 491 SUPERFAMILY Protein kinase-like (PK-like) 150 450 IPR011009 -
Prci3g2107 491 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 36 457 - -
Prci3g2107 491 ProSiteProfiles Protein kinase domain profile. 103 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2107 491 FunFam PTI1-like tyrosine-protein kinase 3 238 464 - -
Prci3g2107 491 Pfam Protein kinase domain 177 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2107 Prci-Chr3 35175170 35177044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2107 75 476 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 42.263 6.13e-105 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Prci3g2107 Pkinase 2.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2107 - - pcin:129305556 991.104