Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2098 ATGAGATACTTTCACCTTCTTCTGGTTCTGTCCTGGTTTTTGTCCATCCAAAGCAGCTATGAACTGCAGGCTGCTCAAACTCGAGTCCTGTCACAGTTGAGGAAGTATCTGGAGAACCCTCCCTCGTTGGAAACTTGGGAAGATTATCATGGAGACTTCTGTAACATATCTCCATCCGCACGGATGAGCATTAAATGTGAGGACAATTCTGTAACAGAGCTTAAAATTATGGGAGATAAACCTGTGAAGGTCAAAGAGTTTAACGGGTTAGCGATTCCTAATCAAACATTGTCCGGGAGCTTCTCTATTGATTCTTTTTTTACCACATTGGTCAGGTTAACCAACTTGAAGGTTCTTAGCTTGGTGTCATTGGGGATTTGGGGGCCACTCCCTGATAAGATTCATCGATTATCTTCACTTGAAATTCTGGACTTGAGCTCAAACTTCTTATACGGCACAATCCCACCAAAAATATCTACAATGGTAAACCTTCATGCACTAACCATTAACGCCAATTATTTCAACAGCACTATGCCGGATTGGTTTGATTCGTTATCTAATCTACAAGCTCTGAGTTTGAATGGCAACCGCTTGAAGGGTTCGTTCCCCTCTTCACTATGCAAAATTAAAGCGCTTACTGACATTTCCTTGTCTCACAATGACTTGTCTGGTAAATTGCCTGATCTGAGTACTCTCACTGGCTTGCATGTGTTGAATTTAGGAGATAATCATTTAGACTCTGAACTACCATTGATGCCGAAATCAGTAGTTACAATTCTCCTAAGTAAAAATTCATTTTCTGGAAAGATTCCCAAGCAGTTCGGTGAACTGGTTCTGCTTCAACATCTAGACCTTTCATCAAATCATCTTGGCGGGATTCCTCCATCCCCATTGTTCTCTTTGCCTAACATCAGGTACATGAATTTGGCAAGCAATATTCTGAGCGGGTCCCTTTCAAACAAACTAACTTGTGGGAGCAAACTTGGGTATGTGGACATTTCTAGTAACAAGCTAACTGGTGGACTTCCATCTTGCTTGGCAAGCACGTCTGATAGACGAGTCGTGAAAAATGGTGGGAATTGCTTCCAGACGCGAGGGTCTTACTGTAAACAGCCCAGTGTGAAGAAGTTCCAGGCACTGAAATTAGTTGGAGTTGTGGCCATTATTACTGGACTAGTGCTCATTCTTGTGCTGTTTGTGTTTGGTGTTTTCTTTTGTCGCAAGAGATGCCATTTGAGGAAAACATCTGGGCGGCATGCGGTGCCAAAAAGAGTAAGAGATAATTCCGCAGCAGGGGTTTCCTCAGAGCTCCTTGCAAGTGCCAGATTCATTGCTCAAGCAGTGAAGCTTGGAGCACAAGCTAATCCAGTCTGTCGAGTGTTTTCAATTGAAGAGCTGAAGGAAGCTACGAAAGATTTTGACGTGTCAACTTATATGGGTGAAGGCTCCATAGGGAAGTTGTACAAAGGTAAACTGGAAAATGGACCCTATGTAGCAATACGATCTTTGTCTCTCTCAAAGAAATGCTCAATTCAGAATCTTAAAGGGCGGCTGGATTTACTCTCAAAGCTTCATCATCCTAATTTGGTTTGCCTCTTGGGTCATTGTATAGATAGTGGTGGACAAGATCATTCCAGTACCCTCAAATTTCATCTTGTTTATGAGTATATACCAAATGGGAATTATCGTGCACATCTGTCAGAGAAGGCACTAAAGTGGTCTGATAGACTGGCAATTTTAATTGGAGTTGCCAAGGCAGTGCATTTCTTGCATACTGGGGTTATACCTGGCTGTTTTAGAAACCAATTGAAGACGAACAATATTTTGCTTGATGAGCATAACATTCCCAAACTGAGTGATTATGGGATGTCCCTCATCAGAGAAGAAATTGAAAAGCTTGAGGCTACTGGAGAGAGCCCAATATCATGCCAAACGACAGCAATGGAGGATGATGTTTATAATTTTGGATTCATATTGTTGGAATCGCTTGTTGGTACCATAGCAAGTGAGAAAGGAGAAGAATATTTCCTGACTGAAAAGGCATCATTTGGGAGTCAAGATGGTCGAAGAAAGATAGTGGATCCGATAGTGTTGACCACCTGCTCTCAAGAGTCATTATCAATTGTAGTATCTATAACAACCAAATGCATATCCCCGGAACCATCATGTCGTCCCTCTTTTGAAGATGTCCTTTGGAACTTACAATACGCAGCTCAAGTCCAGGCCACTGCAGATGCAGATCAGAAATCAGATTCTGCATGA 2262 0.4213 MRYFHLLLVLSWFLSIQSSYELQAAQTRVLSQLRKYLENPPSLETWEDYHGDFCNISPSARMSIKCEDNSVTELKIMGDKPVKVKEFNGLAIPNQTLSGSFSIDSFFTTLVRLTNLKVLSLVSLGIWGPLPDKIHRLSSLEILDLSSNFLYGTIPPKISTMVNLHALTINANYFNSTMPDWFDSLSNLQALSLNGNRLKGSFPSSLCKIKALTDISLSHNDLSGKLPDLSTLTGLHVLNLGDNHLDSELPLMPKSVVTILLSKNSFSGKIPKQFGELVLLQHLDLSSNHLGGIPPSPLFSLPNIRYMNLASNILSGSLSNKLTCGSKLGYVDISSNKLTGGLPSCLASTSDRRVVKNGGNCFQTRGSYCKQPSVKKFQALKLVGVVAIITGLVLILVLFVFGVFFCRKRCHLRKTSGRHAVPKRVRDNSAAGVSSELLASARFIAQAVKLGAQANPVCRVFSIEELKEATKDFDVSTYMGEGSIGKLYKGKLENGPYVAIRSLSLSKKCSIQNLKGRLDLLSKLHHPNLVCLLGHCIDSGGQDHSSTLKFHLVYEYIPNGNYRAHLSEKALKWSDRLAILIGVAKAVHFLHTGVIPGCFRNQLKTNNILLDEHNIPKLSDYGMSLIREEIEKLEATGESPISCQTTAMEDDVYNFGFILLESLVGTIASEKGEEYFLTEKASFGSQDGRRKIVDPIVLTTCSQESLSIVVSITTKCISPEPSCRPSFEDVLWNLQYAAQVQATADADQKSDSA 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2098 753 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 557 753 - -
Prci3g2098 753 Pfam Leucine rich repeat 256 312 IPR001611 GO:0005515
Prci3g2098 753 Pfam Leucine rich repeat 163 222 IPR001611 GO:0005515
Prci3g2098 753 Gene3D Ribonuclease Inhibitor 23 255 IPR032675 -
Prci3g2098 753 ProSiteProfiles Protein kinase domain profile. 473 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2098 753 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 256 374 - -
Prci3g2098 753 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 23 254 - -
Prci3g2098 753 ProSiteProfiles Leucine-rich repeat profile. 279 300 IPR001611 GO:0005515
Prci3g2098 753 Gene3D Ribonuclease Inhibitor 256 371 IPR032675 -
Prci3g2098 753 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 436 556 - -
Prci3g2098 753 Gene3D Transferase(Phosphotransferase) domain 1 557 752 - -
Prci3g2098 753 PANTHER UNNAMED PRODUCT 92 666 - -
Prci3g2098 753 SUPERFAMILY Protein kinase-like (PK-like) 456 734 IPR011009 -
Prci3g2098 753 Pfam Protein tyrosine and serine/threonine kinase 477 732 IPR001245 GO:0004672|GO:0006468
Prci3g2098 753 ProSiteProfiles Leucine-rich repeat profile. 211 233 IPR001611 GO:0005515
Prci3g2098 753 SMART LRR_typ_2 277 301 IPR003591 -
Prci3g2098 753 SMART LRR_typ_2 232 255 IPR003591 -
Prci3g2098 753 SMART LRR_typ_2 185 209 IPR003591 -
Prci3g2098 753 SMART LRR_typ_2 137 161 IPR003591 -
Prci3g2098 753 SUPERFAMILY L domain-like 35 378 - -
Prci3g2098 753 Gene3D Phosphorylase Kinase; domain 1 445 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2098 Prci-Chr3 35138485 35143215 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2098 7 682 Miscellaneous Gene Families AT5G14210 57.266 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Prci3g2098 PK_Tyr_Ser-Thr 4.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2098 - - gmx:100813412 1071.23