Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2097 ATGAGATACTTTCACCTTCTTCTGGTTCTGTCCTGGTTTTTGTCCATCCAAAGCAGCTATGAACTGCAGGCTGCTCAAACTCGAGTCCTGTCACAGTTGAGGAAGTATCTGGAGAACCCTCCCTCGTTGGAAACTTGGGAAGATTATCATGGAGACTTCTGTAACATATCTCCATCCGCACGGATGAGCATTAAATGTGAGGACAATTCTGTAACAGAGCTTAAAATTATGGGAGATAAACCTGTGAAGGTCAAAGAGTTTAACGGGTTAGCGATTCCTAATCAAACATTGTCCGGGAGCTTCTCTATTGATTCTTTTTTTACCACATTGGTCAGGTTAACCAACTTGAAGGTTCTTAGCTTGGTGTCATTGGGGATTTGGGGGCCACTCCCTGATAAGATTCATCGATTATCTTCACTTGAAATTCTGGACTTGAGCTCAAACTTCTTATACGGCACAATCCCACCAAAAATATCTACAATGGTAAACCTTCATGCACTAACCATTAACGCCAATTATTTCAACAGCACTATGCCGGATTGGTTTGATTCGTTATCTAATCTACAAGCTCTGAGTTTGAATGGCAACCGCTTGAAGGGTTCGTTCCCCTCTTCACTATGCAAAATTAAAGCGCTTACTGACATTTCCTTGTCTCACAATGACTTGTCTGGTAAATTGCCTGATCTGAGTACTCTCACTGGCTTGCATGTGTTGAATTTAGGAGATAATCATTTAGACTCTGAACTACCATTGATGCCGAAATCAGTAGTTACAATTCTCCTAAGTAAAAATTCATTTTCTGGAAAGATTCCCAAGCAGTTCGGTGAACTGGTTCTGCTTCAACATCTAGACCTTTCATCAAATCATCTTGGCGGGATTCCTCCATCCCCATTGTTCTCTTTGCCTAACATCAGGTACATGAATTTGGCAAGCAATATTCTGAGCGGGTCCCTTTCAAACAAACTAACTTGTGGGAGCAAACTTGGGTATGTGGACATTTCTAGTAACAAGCTAACTGGTGGACTTCCATCTTGCTTGGCAAGCACGTCTGATAGACGAGTCGTGAAAAATGGTGGGAATTGCTTCCAGACGCGAGGGTCTTACTGTAAACAGCCCAGTGTGAAGAAGTTCCAGGCACTGAAATTAGTTGGAGTTGTGGCCATTATTACTGGACTAGTGCTCATTCTTGTGCTGTTTGTGTTTGGTGTTTTCTTTTGTCGCAAGAGATGCCATTTGAGGAAAACATCTGGGCGGCATGCGGTGCCAAAAAGAGTAAGAGATAATTCCGCAGCAGGGGTTTCCTCAGAGCTCCTTGCAAGTGCCAGATTCATTGCTCAAGCAGTGAAGCTTGGAGCACAAGCTAATCCAGTCTGTCGAGTGTTTTCAATTGAAGAGCTGAAGGAAGCTACGAAAGATTTTGACGTGTCAACTTATATGGGTGAAGGCTCCATAGGGAAGTTGTACAAAGGTAAACTGGAAAATGGACCCTATGTAGCAATACGATCTTTGTCTCTCTCAAAGAAATGCTCAATTCAGAATCTTAAAGGGCGGCTGGATTTACTCTCAAAGCTTCATCATCCTAATTTGGTTTGCCTCTTGGGTCATTGTATAGATAGTGGTGGACAAGATCATTCCAGTACCCTCAAATTTCATCTTGTTTATGAGTATATACCAAATGGGAATTATCGTGCACATCTGTCAGAATTTTCTCCAGAGAAGGCACTAAAGTGGTCTGATAGACTGGCAATTTTAATTGGAGTTGCCAAGGCAGTGCATTTCTTGCATACTGGGGTTATACCTGGCTGTTTTAGAAACCAATTGAAGACGAACAATATTTTGCTTGATGAGCATAACATTCCCAAACTGAGTGATTATGGGATGTCCCTCATCAGAGAAGAAATTGAAAAGCTTGAGGCTACTGGAGAGAGCCCAATATCATGGTATGAATGCCGATTGAAGCTTATTTTATTTCTAGCAGAATGCCTATCCGCTGAATTTTTGGCTCGTGTTGGGTTGGAATCCAAACGACAGCAATGGAGGATGATGTTTATAATTTTGGATTCATATTGTTGGAATCGCTTGTTGGTACCATAG 2094 0.4193 MRYFHLLLVLSWFLSIQSSYELQAAQTRVLSQLRKYLENPPSLETWEDYHGDFCNISPSARMSIKCEDNSVTELKIMGDKPVKVKEFNGLAIPNQTLSGSFSIDSFFTTLVRLTNLKVLSLVSLGIWGPLPDKIHRLSSLEILDLSSNFLYGTIPPKISTMVNLHALTINANYFNSTMPDWFDSLSNLQALSLNGNRLKGSFPSSLCKIKALTDISLSHNDLSGKLPDLSTLTGLHVLNLGDNHLDSELPLMPKSVVTILLSKNSFSGKIPKQFGELVLLQHLDLSSNHLGGIPPSPLFSLPNIRYMNLASNILSGSLSNKLTCGSKLGYVDISSNKLTGGLPSCLASTSDRRVVKNGGNCFQTRGSYCKQPSVKKFQALKLVGVVAIITGLVLILVLFVFGVFFCRKRCHLRKTSGRHAVPKRVRDNSAAGVSSELLASARFIAQAVKLGAQANPVCRVFSIEELKEATKDFDVSTYMGEGSIGKLYKGKLENGPYVAIRSLSLSKKCSIQNLKGRLDLLSKLHHPNLVCLLGHCIDSGGQDHSSTLKFHLVYEYIPNGNYRAHLSEFSPEKALKWSDRLAILIGVAKAVHFLHTGVIPGCFRNQLKTNNILLDEHNIPKLSDYGMSLIREEIEKLEATGESPISWYECRLKLILFLAECLSAEFLARVGLESKRQQWRMMFIILDSYCWNRLLVP 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2097 697 Pfam Leucine rich repeat 256 312 IPR001611 GO:0005515
Prci3g2097 697 Pfam Leucine rich repeat 163 222 IPR001611 GO:0005515
Prci3g2097 697 ProSiteProfiles Leucine-rich repeat profile. 279 300 IPR001611 GO:0005515
Prci3g2097 697 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 256 374 - -
Prci3g2097 697 Gene3D Ribonuclease Inhibitor 256 371 IPR032675 -
Prci3g2097 697 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 436 556 - -
Prci3g2097 697 Gene3D Transferase(Phosphotransferase) domain 1 557 647 - -
Prci3g2097 697 Gene3D Ribonuclease Inhibitor 23 255 IPR032675 -
Prci3g2097 697 Pfam Protein tyrosine and serine/threonine kinase 477 648 IPR001245 GO:0004672|GO:0006468
Prci3g2097 697 Gene3D Phosphorylase Kinase; domain 1 445 556 - -
Prci3g2097 697 SUPERFAMILY L domain-like 34 380 - -
Prci3g2097 697 SUPERFAMILY Protein kinase-like (PK-like) 456 633 IPR011009 -
Prci3g2097 697 ProSiteProfiles Leucine-rich repeat profile. 211 233 IPR001611 GO:0005515
Prci3g2097 697 ProSiteProfiles Protein kinase domain profile. 473 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2097 697 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 23 254 - -
Prci3g2097 697 SMART LRR_typ_2 277 301 IPR003591 -
Prci3g2097 697 SMART LRR_typ_2 232 255 IPR003591 -
Prci3g2097 697 SMART LRR_typ_2 185 209 IPR003591 -
Prci3g2097 697 SMART LRR_typ_2 137 161 IPR003591 -
Prci3g2097 697 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 72 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2097 Prci-Chr3 35138478 35142704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2097 7 643 Miscellaneous Gene Families AT5G14210 57.822 0.0 713
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Prci3g2097 PK_Tyr_Ser-Thr 5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2097 - - gmx:100784640 915.99