Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2022 ATGAGACAATTCAGGGTGTTGAAGACATTGGGGAGTGGAGACGTAGGAAAAGTTCATCTAGCAGAGTTGATTGGCACAGGAGCTTATTTTGCCATGAAAATTATGAATAAAACGGAACTAGCGACTCGCAAGAAGCTTCTTAGGGTTCAGAGAAGAGAGATATTGCAGTCTTTGGATCATCCATTTTCTGCCCATTATATGCACACTGAGACACAGACATTCTCTTGCCTAGTAATGGAGTTCTGCCCTGGTGGGGACCTTCATGCACTCAGGCAAAGACAACCTGGGAATATTTTTTCAGAGCACGCTGCCAGGTTCTATGTGGCAGAGGTGCTTCTTGCTTTGGAGTACCTGCACATGCTGGGGATCATCTACCGAGACCTTAAACCTGAGAATGTTTTAGTGAGGGAAGATGGTCACATAATGCTGTCAGATTTCGACCTCTCTCTGAGGTGCACTGTCAGCCCAACTCTAGTAAGATCATCAAACCCTTCCATGAAGACAAAAAGCTCAAGATACTGTACTCCACCAGCTTGCATTCAACCCACTTGTGTAATGCAGCCAGATTGCATCCAACCTGCATGTTTCACACCCCACCTACGATCCGGAAAGTCCAAGAAAGAAAAAAAGTTGACAGCCAGATATGAAATGCATCAGCAGGTGGCCCCTCTTCCTGAGCTTATTGCAGAGCCAACAAATGCACGTTCGATGTCCTTTGTGGGCACTCATGAGTACTTGGCTCCAGAAATTATCAAAGGAGAAGGGCATGGCAGTGCTGTGGACTGGTGGACTTTTGGGATATTCTTATATGAGCTTCTGTTTGGGAGAACGCCGTTCAAAGGTTCAGTAACTCGAGCAACTCTGCTCAATGTGGTGGGCCAGCCCTTGAGATTTCCAGAATCACCTGGTGTCAGCTTTGCTGCTAGAGACTTGATAAGGGGTTTGCTTGTGAAAGAGCCACAGCATCGTCTTGCTTACAGACGTGGAGCTACCGAAATCAAACAACATCCATTCTTTCAGAACGTTAATTGGGCACTCATTCGTTGCACTCATCCTCCAGATGTCCCCAGACAGGCCATGAAAGCAGCTGCCACTGGTTTAAAGCCTTCCTATGGTAAATATTTAGATGTTGATTACTTTTAA 1143 0.4593 MRQFRVLKTLGSGDVGKVHLAELIGTGAYFAMKIMNKTELATRKKLLRVQTXREILQSLDHPFSAHXYMHTETQTFSCLVMEFCPGGDLHALRQRQPGNIFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVRSSNPSMKTKSSRYCTPPACIQPTCVMQPDCIQPACFTPHLRSGKSKKEKKLTARYEMHQQVAPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSVTRATLLNVVGQPLRFPESPGVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCTHPPDVPRQAMKAAATGLKPSYGKYLDVDYF 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2022 382 ProSiteProfiles Protein kinase domain profile. 4 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2022 382 FunFam serine/threonine-protein kinase D6PK-like 236 359 - -
Prci3g2022 382 CDD STKc_phototropin_like 2 361 - -
Prci3g2022 382 SMART serkin_6 4 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2022 382 PANTHER FLIPPASE KINASE 1-RELATED 1 363 - -
Prci3g2022 382 SUPERFAMILY Protein kinase-like (PK-like) 2 360 IPR011009 -
Prci3g2022 382 Pfam Protein kinase domain 238 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2022 382 Pfam Protein kinase domain 5 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2022 382 FunFam serine/threonine-protein kinase D6PK-like 88 155 - -
Prci3g2022 382 Gene3D Transferase(Phosphotransferase) domain 1 90 358 - -
Prci3g2022 382 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Prci3g2022 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2022 Prci-Chr3 34591794 34593754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2022 2 382 AGC Kinase Gene Family AT3G27580 68.148 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Prci3g2022 Pkinase 2.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2022 K08286 - gmx:100810909 643.269