Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2008 ATGCTGCCTTCAAGGTTGAAATCTCAATTTATGACCAAAAACATGGAGCATGTATCAGAAAAAAGATTTCCTCTCAATGCTAAAGATTATGAGCTGTATGAAGAAGTTGGCGAAGGTGTTGGCGCCACTGTGTACAGAGCTCTTTGTATTCCACTCAACAAGATAGTTGCAATCAAGGTTCTTGATCTTGAAAAGTGCAATAATGATCTGGATGGCATTAGGAGAGAGGTACAGACAATGACCTTGATAAACCATCCAAATGTTTTATGCTCGCACTGCTCTTTCACTAGTGGACACAATCTTTGGGTGGTGATGCCATACATGTATGTGGGATCCTGCCTTCAAATAATGAAATCTTCCTATCCGGAGGGCTTTGAAGAGCCTGTTATTGCTACTTTGCTGCGAGAAGTTCTGAAAGCTCTTCTCTACCTTCATGCCCATGGACACATACATAGAGATGTTAAGGCTGGAAATATTTTGATTGATTCTAAAGGTGCGGTCAAATTAGCTGACTTTGGGGTGTCAGCGTGTATGTTTGATACTGGAGATAGGCAACATTCAAGAAACACTTTTGTTGGAACTCCTTGCTGGATGGCTCCTGAAGTTATGCAACAACTACATGGATATGATTTTAAAGCAGACATATGGTCATTTGGTATAACAGCACTTGAACTTGCTCATGGCCACGCCCCATTTTCCAAGTATCCTCCAATGAAAGTTTTACTGATGACTTTACAAAATGCCCCTCCTGGCCTTGATTATGAAAGAGACAAGAGATTTTCAAAGTCTTTCAAAGAGATGGTTGCCGCCTGCCTAGTGAAAGACCCAAAGAAACGTCCAAGTTCAGAAAAGCTTTTAAAACATCACTTCTTTAAACATGCTCGCACCAGTGAATATTTATCTCAAACCATTTTAGATGGCCTTGCTCCATTAGAAAATCGTTTTAGGATGCTGAAGGCAAAAGAAGCAGACTTATTGATGCAGAACGAGGCTCCTTACGAGGATAAGGAACAATTATCACAGAAAGAATATATACGGGGAATTAGTGCTTGGAATTTCAACCTTGAGGATTTAAAAGGTCAAGCTGCTCTAATTCAAGACGATGACATGCCAGATGCAGAAGAGACAGGTATGGATAAAAAGCAAAAGGAAAGGTCTGATAATGTTGGGATTCCGGCAGAAGGGCCTTCTTCTGGAGCAGCTAATCATTCAGATACTACACCCGTACTGGGAAAGGAGGACGGGTTCCATGATCTTCAAGACTTGGAGAGTTCACTTGCTTCATTTCCTATTAAACCTCTTCAAGCTCTTAAAGGTTATTTTGACGTTTGTGAGAACAGTGTCAACAGTGCTGCTTTGGGAGATTCAGATCGGCATGATGGAAGAAATGAGAATGGCATTTCTGGGACAAGTAATTCATTACCACAAAATGCTATAGCTGAGCATGTAAAGTTGAGTGCTTCTCTCCTTCTTGATGGTTCTTTTTCTGCTAAAAAAATTATTACTCTTGGGGAAAGGGATTATCTGCAGCAGAAATGTTACCACGAGGGGAATAGTGGTCCATTGTTGTATAAGCAGAAAAGAGAAACCAACAACCTCTCATCTGTTGATGATGCATCAGAAGCATTTGTCCAGCGTAAGGGGCGATTCAAGGTCACATCAGCAGATCTCAGTCCCAAGGGTCCTGTGAACTGCACTTTTGGTCCTGTTTGTAGAGGTCTTTCCAGTCCACCAGAACAAAACCCTACTTCTGCCTCTATTCTTGCATCACTGCATTTCATTTTGCAGCAGAACAGTTTGCAAAGGGAAGAGATTATTAAATTAATTAAGTACGCAGAGCAATCTTGTGGTAGTAATGTAGAATTTGTGGAGGCAGGGATTGTTGATCTTTTGCAGGTACCACCCACAACAATTAGGGAGAGAGAGTTGCATCTTCAGGTGATCGAACTCCAACAGAGCATCGAGAAGCTTGTTGAGGAATTGCAAAGGCAAAAGGTGAAAAGTTCCCAGTTAGAGAAACAGTTGAAATTTGTAAGCAACGGTGTGGAAAAGTGA 2055 0.4131 MLPSRLKSQFMTKNMEHVSEKRFPLNAKDYELYEEVGEGVGATVYRALCIPLNKIVAIKVLDLEKCNNDLDGIRREVQTMTLINHPNVLCSHCSFTSGHNLWVVMPYMYVGSCLQIMKSSYPEGFEEPVIATLLREVLKALLYLHAHGHIHRDVKAGNILIDSKGAVKLADFGVSACMFDTGDRQHSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEMVAACLVKDPKKRPSSEKLLKHHFFKHARTSEYLSQTILDGLAPLENRFRMLKAKEADLLMQNEAPYEDKEQLSQKEYIRGISAWNFNLEDLKGQAALIQDDDMPDAEETGMDKKQKERSDNVGIPAEGPSSGAANHSDTTPVLGKEDGFHDLQDLESSLASFPIKPLQALKGYFDVCENSVNSAALGDSDRHDGRNENGISGTSNSLPQNAIAEHVKLSASLLLDGSFSAKKIITLGERDYLQQKCYHEGNSGPLLYKQKRETNNLSSVDDASEAFVQRKGRFKVTSADLSPKGPVNCTFGPVCRGLSSPPEQNPTSASILASLHFILQQNSLQREEIIKLIKYAEQSCGSNVEFVEAGIVDLLQVPPTTIRERELHLQVIELQQSIEKLVEELQRQKVKSSQLEKQLKFVSNGVEK 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2008 684 Gene3D Transferase(Phosphotransferase) domain 1 111 342 - -
Prci3g2008 684 Coils Coil 640 674 - -
Prci3g2008 684 SMART serkin_6 30 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2008 684 CDD STKc_OSR1_SPAK 28 291 - -
Prci3g2008 684 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 20 665 IPR047173 GO:0043539
Prci3g2008 684 FunFam Serine/threonine-protein kinase BLUS1 19 107 - -
Prci3g2008 684 ProSiteProfiles Protein kinase domain profile. 30 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2008 684 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
Prci3g2008 684 FunFam serine/threonine-protein kinase BLUS1 isoform X1 111 344 - -
Prci3g2008 684 MobiDBLite consensus disorder prediction 374 388 - -
Prci3g2008 684 Gene3D Phosphorylase Kinase; domain 1 18 106 - -
Prci3g2008 684 Pfam Protein kinase domain 30 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2008 684 SUPERFAMILY Protein kinase-like (PK-like) 27 337 IPR011009 -
Prci3g2008 684 MobiDBLite consensus disorder prediction 364 414 - -
Prci3g2008 684 MobiDBLite consensus disorder prediction 451 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2008 Prci-Chr3 34460198 34488958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2008 15 680 MAP Kinase Kinase Kinase Kinase AT5G14720 64.964 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Prci3g2008 Pkinase 1.1e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2008 K08835 - gmx:100778837 985.711