Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2007 ATGAAGGCGGGAGGATTGGGTGAAAAGCTGGATTTACGGGAAAAAAGAAGAGAACACATGTCAGAAATGCCTCAACGACCAAGAAGGAGGATACATTTTAGCAAATTATATTCATTTTCGTGCCTAAAATCCCCCTTCAGACATGATCAGTCTCAGATTGGGCAGAGAGGCTACTCAAGGGTCGTATATTGCAATGACCCTGATAACCCAGAAGCTGCTCAGTTGAATTACATTGGCAATTATGTTTCAACGACCAAGTATACGGCTTTTAATTTTATTCCCAAGTCCTTATTTGAGCAGTTTAGGAGGGTTGCAAATATCTACTTTCTCATTGTCGCATGTCTTTCGTTTAGTCCATTGGCACCTTTTACAGCTTTAAGTATTGTTGCACCGTTGCTGGTGGTGATGGGAGCTACCATGGCCAAGGAAGCTGTGGAAGATTGGAGGAGAAGAAAACAGGATATAGAAGCAAACAACAAAAAGGTTAATGTATTTAGTGGAAATACATTTGTGGAGACCAGATGGAAGAAACTCCGGGTGGGTGATCTCATTAAAGTGTATAAGGATGAATACTTTCCTGCTGATCTTCTTCTGCTTTCATCAAGTTATGAGGATGGGGTTTGCTATGTTGAGACAATGAATCTTGATGGAGAAACCAATTTAAAACTAAAGCATGCTTTGGAAGTCACAGCTCATCTTCATGGTGAAAATTCCCTTGAAAAGTTTAGGGCAGTGATCAAATGTGAAGATCCTAATGAAAATCTGTACTCATTTGTTGGAACCTTGTACTATGAAGAAAAAGAATACCCGCTTTCCTTGCAACAGATTCTTTTAAGAGACTCCAAGCTGAAAAACACTGAATATGTGTATGCTGTTGTTATCTTTACTGGCCATGATACAAAAGTGATGCAGAATGCCACTGAACCACCGTCCAAGAGAAGCAAAATTGAGAGAAAAATGGATAAAATAATCTACATCCTCTTCAGTACCTTGGTCTTGATATCTTTTATTGGCTCTGTCTATTTTGGCATTGAGACAAAAAGGGATATCAATGCCAGCACGTACAGAAGATGGTATCTTCGTCCAGACAATACAACAGTGTTTTATGATCCTAAAAGGCCAACACTTGCTGCTATTCTTCATTTTCTAACTGCCCTGATGTTGTATGGATATCTAATTCCCATCTCACTGTATGTATCCATTGAAATTGTGAAAGTTTTGCAGAGTATTTTCATCAACCAAGATCTGGAAATGTATTACGAAGAAACTGATATGCCAGCTCATGCACGCACATCTAATTTAAATGAGGAACTTGGGCAGGTTGATACTATATTGTCTGATAAAACAGGTACTTTGACATGTAACTCTATGGAGTTTGTGAAATGTTCCATAGCAGGCACTCCATATGGTCATGGTACGACAGAAGTGGAGAGAGCACTTGCACGGAGGGGGAGAAATGGGGAACCAGAAGCCGATGGTTTATTATCTGGATCACAGGGCCAGAATAATGATGCTGTTGACTCCAAGCAGCCAACTAAGGGTTTCAACTTCAGAGATGAACGTATAATGAATGGGAAATGGATTAATGAACCTCACTCAGGCATCATACAGAAATTCTTTCGAGTCTTAGCAATTTGTCATACAGCTATTCCTGATGTAGATGAAGAATCCGGAGAAATTTCCTATGAAGCTGAGTCACCAGATGAAGCAGCTTTTGTCATAGCTGCAAAGGAACTTGGTTTTGAATTTTTTGCAAGGACCCAAACAAGCATATCACTGCATGAATTGGACTATGACAGTGGAAAAAAGGTTGACAGGATGTACGAGCTTCTGCATGTCTTAGAGTTCAGCAGTTCCCGTAAAAGGATGTCAGTGATTGTAAGGAATGAAGAAGATCAACTATTGCTCCTGTGCAAGGGTGCAGACAGTGTTATGCTTGAAAGACTCTCCGAAGATGGAAGACAGTTTGAGGCTGAGACTGAAGATCATATCAAAAGATATTCTGAGGCAGGTTTAAGAACTCTGGTAATCGCATATCGTGAACTTGGTGAAGAAGAATATAAGTTGTGGGAAAGGGAGTTTTTAAAAGCCAGAACTTCTGTAGCTGCAGACCGTGATGTATTGGTGGATGCAGCCGCTGATGAGATGGAAAGAGATTTGATTCTTCTTGGTGCAACAGCAGTTGAGGACAGACTGCAGAAGGGGGTTCCTGAATGTATTGATAAGCTTGCCCAGGCAGGAATAAAATTATGGGTATTGACTGGAGACAAGATGGAAACTGCAGTCAATATAGGGTATGCTTGCAGTTTACTCAGGCAAGACATGAAACAGATAGTGGTAACTCTGGATTCACCAGATATCCTATCCTTAGAAAAACAAGGGGACAAGGAGGCTCTTACAAAGGCTTCTCTTGAAAGCATTAAAAAGCAAATCAGAGAGGGAATTTCACAAATTAAGTCTGCAAAAGAAAGTTCTAAAGAAAGTTCTACTGAATTTGGCTTGATAATTGATGGGAAGTCTTTGGATTACTCTCTTAACAAGAACGTTGAGAAGTCATTTTTTGATCTGGCTATTAATTGTGCTTCTGTCATATGCTGCCGATCTTCACCCAAACAGAAAGCTCGAGTTACAAGATTGGTGAAATTGGGAACTGGGAAGACAGTACTGTCAATTGGTGATGGTGCAAACGATGTTGGCATGCTTCAGGAAGCTGATATAGGAGTTGGTATTAGTGGTGCTGAAGGGATGCAGGCTGTGATGGCAAGTGATTTTGCAGTAGCTCAATTTCGTTTTCTGGAGCGTTTGTTGTTGGTACATGGCCACTGGTGCTATAGACGAATTGCAATGATGATATGTTATTTTTTCTATAAGAACATTGCATTCGGATTTACTCTATTTTGGTTTGAGGCGTACGCTTCTTTCTCTGGCCAACCTGCATACAACGATTGTATCCTTTTCTATATCTGGAGGGAATAG 2976 0.4039 MKAGGLGEKLDLREKRREHMSEMPQRPRRRIHFSKLYSFSCLKSPFRHDQSQIGQRGYSRVVYCNDPDNPEAAQLNYIGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLIVACLSFSPLAPFTALSIVAPLLVVMGATMAKEAVEDWRRRKQDIEANNKKVNVFSGNTFVETRWKKLRVGDLIKVYKDEYFPADLLLLSSSYEDGVCYVETMNLDGETNLKLKHALEVTAHLHGENSLEKFRAVIKCEDPNENLYSFVGTLYYEEKEYPLSLQQILLRDSKLKNTEYVYAVVIFTGHDTKVMQNATEPPSKRSKIERKMDKIIYILFSTLVLISFIGSVYFGIETKRDINASTYRRWYLRPDNTTVFYDPKRPTLAAILHFLTALMLYGYLIPISLYVSIEIVKVLQSIFINQDLEMYYEETDMPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGTPYGHGTTEVERALARRGRNGEPEADGLLSGSQGQNNDAVDSKQPTKGFNFRDERIMNGKWINEPHSGIIQKFFRVLAICHTAIPDVDEESGEISYEAESPDEAAFVIAAKELGFEFFARTQTSISLHELDYDSGKKVDRMYELLHVLEFSSSRKRMSVIVRNEEDQLLLLCKGADSVMLERLSEDGRQFEAETEDHIKRYSEAGLRTLVIAYRELGEEEYKLWEREFLKARTSVAADRDVLVDAAADEMERDLILLGATAVEDRLQKGVPECIDKLAQAGIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVVTLDSPDILSLEKQGDKEALTKASLESIKKQIREGISQIKSAKESSKESSTEFGLIIDGKSLDYSLNKNVEKSFFDLAINCASVICCRSSPKQKARVTRLVKLGTGKTVLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAVAQFRFLERLLLVHGHWCYRRIAMMICYFFYKNIAFGFTLFWFEAYASFSGQPAYNDCILFYIWRE 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2007 991 SUPERFAMILY Calcium ATPase, transmembrane domain M 75 975 IPR023298 -
Prci3g2007 991 CDD P-type_ATPase_APLT_Dnf-like 79 987 - -
Prci3g2007 991 FunFam Phospholipid-transporting ATPase 565 723 - -
Prci3g2007 991 FunFam Phospholipid-transporting ATPase 138 307 - -
Prci3g2007 991 SFLD Haloacid Dehalogenase 427 942 - -
Prci3g2007 991 Gene3D - 724 931 IPR023214 -
Prci3g2007 991 SUPERFAMILY Calcium ATPase, transduction domain A 159 306 IPR008250 -
Prci3g2007 991 MobiDBLite consensus disorder prediction 481 514 - -
Prci3g2007 991 NCBIfam phospholipid-translocating P-type ATPase 77 985 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Prci3g2007 991 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 38 985 - -
Prci3g2007 991 SFLD p-type atpase 427 942 IPR044492 -
Prci3g2007 991 SUPERFAMILY HAD-like 440 946 IPR036412 -
Prci3g2007 991 Coils Coil 138 158 - -
Prci3g2007 991 Pfam Phospholipid-translocating P-type ATPase C-terminal 919 986 IPR032630 -
Prci3g2007 991 ProSitePatterns E1-E2 ATPases phosphorylation site. 447 453 IPR018303 -
Prci3g2007 991 Pfam Cation transport ATPase (P-type) 563 649 - -
Prci3g2007 991 NCBIfam HAD-IC family P-type ATPase 381 467 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci3g2007 991 NCBIfam HAD-IC family P-type ATPase 862 973 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci3g2007 991 FunFam Phospholipid-transporting ATPase 722 931 - -
Prci3g2007 991 Pfam E1-E2 ATPase 158 351 - -
Prci3g2007 991 PRINTS P-type cation-transporting ATPase superfamily signature 891 910 - -
Prci3g2007 991 PRINTS P-type cation-transporting ATPase superfamily signature 445 459 - -
Prci3g2007 991 Gene3D - 132 308 - -
Prci3g2007 991 Pfam Phospholipid-translocating ATPase N-terminal 62 125 IPR032631 -
Prci3g2007 991 Gene3D - 569 723 IPR023299 GO:0000166
Prci3g2007 991 MobiDBLite consensus disorder prediction 495 510 - -
Prci3g2007 991 MobiDBLite consensus disorder prediction 1 25 - -
Prci3g2007 991 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 522 682 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2007 Prci-Chr3 34447996 34455061 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2007 31 985 Primary Pumps ATPases AT1G68710 65.456 0.0 1341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2007 K01530 - gmx:100779714 1661.74