Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2006 ATGAATCTTGATGGAGAAACCAATTTAAAACTAAAGCATGCTTTGGAAGTCACAGCTCATCTTCATGGTGAAAATTCCCTTGAAAAGTTTAGGGCAGTGATCAAATGTGAAGATCCTAATGAAAATCTGTACTCATTTGTTGGAACCTTGTACTATGAAGAAAAAGAATACCCGCTTTCCTTGCAACAGATTCTTTTAAGAGACTCCAAGCTGAAAAACACTGAATATGTGTATGCTGTTGTTATCTTTACTGGCCATGATACAAAAGTGATGCAGAATGCCACTGAACCACCGTCCAAGAGAAGCAAAATTGAGAGAAAAATGGATAAAATAATCTACATCCTCTTCAGTACCTTGGTCTTGATATCTTTTATTGGCTCTGTCTATTTTGGCATTGAGACAAAAAGGGATATCAATGCCAGCACGTACAGAAGATGGTATCTTCGTCCAGACAATACAACAGTGTTTTATGATCCTAAAAGGCCAACACTTGCTGCTATTCTTCATTTTCTAACTGCCCTGATGTTGTATGGATATCTAATTCCCATCTCACTGTATGTATCCATTGAAATTGTGAAAGTTTTGCAGAGTATTTTCATCAACCAAGATCTGGAAATGTATTACGAAGAAACTGATATGCCAGCTCATGCACGCACATCTAATTTAAATGAGGAACTTGGGCAGGTTGATACTATATTGTCTGATAAAACAGGTACTTTGACATGTAACTCTATGGAGTTTGTGAAATGTTCCATAGCAGGCACTCCATATGGTCATGGTACGACAGAAGTGGAGAGAGCACTTGCACGGAGGGGGAGAAATGGGGAACCAGAAGCCGATGGTTTATTATCTGGATCACAGGGCCAGAATAATGATGCTGTTGACTCCAAGCAGCCAACTAAGGGTTTCAACTTCAGAGATGAACGTATAATGAATGGGAAATGGATTAATGAACCTCACTCAGGCATCATACAGAAATTCTTTCGAGTCTTAGCAATTTGTCATACAGCTATTCCTGATGTAGATGAAGAATCCGGAGAAATTTCCTATGAAGCTGAGTCACCAGATGAAGCAGCTTTTGTCATAGCTGCAAAGGAACTTGGTTTTGAATTTTTTGCAAGGACCCAAACAAGCATATCACTGCATGAATTGGACTATGACAGTGGAAAAAAGGTTGACAGGATGTACGAGCTTCTGCATGTCTTAGAGTTCAGCAGTTCCCGTAAAAGGATGTCAGTGATTGTAAGGAATGAAGAAGATCAACTATTGCTCCTGTGCAAGGGTGCAGACAGTGTTATGCTTGAAAGACTCTCCGAAGATGGAAGACAGTTTGAGGCTGAGACTGAAGATCATATCAAAAGATATTCTGAGGCAGGTTTAAGAACTCTGGTAATCGCATATCGTGAACTTGGTGAAGAAGAATATAAGTTGTGGGAAAGGGAGTTTTTAAAAGCCAGAACTTCTGTAGCTGCAGACCGTGATGTATTGGTGGATGCAGCCGCTGATGAGATGGAAAGAGATTTGATTCTTCTTGGTGCAACAGCAGTTGAGGACAGACTGCAGAAGGGGGTTCCTGAATGTATTGATAAGCTTGCCCAGGCAGGAATAAAATTATGGGTATTGACTGGAGACAAGATGGAAACTGCAGTCAATATAGGGTATGCTTGCAGTTTACTCAGGCAAGACATGAAACAGATAGTGGTAACTCTGGATTCACCAGATATCCTATCCTTAGAAAAACAAGGGGACAAGGAGGCTCTTACAAAGGCTTCTCTTGAAAGCATTAAAAAGCAAATCAGAGAGGGAATTTCACAAATTAAGTCTGCAAAAGAAAGTTCTAAAGAAAGTTCTACTGAATTTGGCTTGATAATTGATGGGAAGTCTTTGGATTACTCTCTTAACAAGAACGTTGAGAAGTCATTTTTTGATCTGGCTATTAATTGTGCTTCTGTCATATGCTGCCGATCTTCACCCAAACAGAAAGCTCGAGTTACAAGATTGGTGAAATTGGGAACTGGGAAGACAGTACTGTCAATTGGTGATGGTGCAAACGATGTTGGCATGCTTCAGGAAGCTGATATAGGAGTTGGTATTAGTGGTGCTGAAGGGATGCAGGCTGTGATGGCAAGTGATTTTGCAGTAGCTCAATTTCGTTTTCTGGAGCGTTTGTTGTTGGTACATGGCCACTGGTGCTATAGACGAATTGCAATGATGATATGTTATTTTTTCTATAAGAACATTGCATTCGGATTTACTCTATTTTGGTTTGAGGCGTACGCTTCTTTCTCTGGCCAACCTGCATACAACGATTGGTACATGTCATTTTACAATGTCTTCTTCACTTCATTTCCTGTAATTGCTCTGGGTGTTTTTGATCAGGATGTTTCTGCCCGACTTTGCCTCAAGTATCCTTTTCTATATCTGGAGGGAATAGAGGACATCCTCTTCAGCTGGCCGCGGATTCTCGGGTGGATGTTTAACGGGGTCATCACTTCCTTGATTATCTTCTTCTTGACCACAAACTCTGTCTATAACCAGGCCTTCAGAAGAGATGGTCAGGTGGTTGATTGGGAAATACTAGGGGTCACAATGTACACTAGTGTTGTGTGGACTGTGAATTGCCAAATAGCACTATCCATTAACTACTTTACTTGGATCCAGCATTTTTTCATATGGGGCAGCATTGTCTTCTGGTATGTGTTCTTGTTGGTTTATGGCTATCTCCCTCCAGCCATATCCACAACAGCTTACAAGATTCTTGTGGAAGCCTGTGCTCCCAGTGGTCTCTATTGGCTTGTTACTCTTTTTGTTGTTGTGTGTGCTCTTCTTCCTTATTTCTCCTATAGGTCTTTCCAGACGCGGTTTCTACCAATGTACCATGATATTATTCAGAAAAAACAAGACGAAGGGTCCGAAACTGAGATATCTGATGACCTGCCAAAAAATGTCAAGGGCAAGTTAAGCCATCTCAGAGAAAAAATGAAGCAAAGAGACTTGTAA 3000 0.407 MNLDGETNLKLKHALEVTAHLHGENSLEKFRAVIKCEDPNENLYSFVGTLYYEEKEYPLSLQQILLRDSKLKNTEYVYAVVIFTGHDTKVMQNATEPPSKRSKIERKMDKIIYILFSTLVLISFIGSVYFGIETKRDINASTYRRWYLRPDNTTVFYDPKRPTLAAILHFLTALMLYGYLIPISLYVSIEIVKVLQSIFINQDLEMYYEETDMPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGTPYGHGTTEVERALARRGRNGEPEADGLLSGSQGQNNDAVDSKQPTKGFNFRDERIMNGKWINEPHSGIIQKFFRVLAICHTAIPDVDEESGEISYEAESPDEAAFVIAAKELGFEFFARTQTSISLHELDYDSGKKVDRMYELLHVLEFSSSRKRMSVIVRNEEDQLLLLCKGADSVMLERLSEDGRQFEAETEDHIKRYSEAGLRTLVIAYRELGEEEYKLWEREFLKARTSVAADRDVLVDAAADEMERDLILLGATAVEDRLQKGVPECIDKLAQAGIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVVTLDSPDILSLEKQGDKEALTKASLESIKKQIREGISQIKSAKESSKESSTEFGLIIDGKSLDYSLNKNVEKSFFDLAINCASVICCRSSPKQKARVTRLVKLGTGKTVLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAVAQFRFLERLLLVHGHWCYRRIAMMICYFFYKNIAFGFTLFWFEAYASFSGQPAYNDWYMSFYNVFFTSFPVIALGVFDQDVSARLCLKYPFLYLEGIEDILFSWPRILGWMFNGVITSLIIFFLTTNSVYNQAFRRDGQVVDWEILGVTMYTSVVWTVNCQIALSINYFTWIQHFFIWGSIVFWYVFLLVYGYLPPAISTTAYKILVEACAPSGLYWLVTLFVVVCALLPYFSYRSFQTRFLPMYHDIIQKKQDEGSETEISDDLPKNVKGKLSHLREKMKQRDL 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2006 999 NCBIfam phospholipid-translocating P-type ATPase 1 965 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Prci3g2006 999 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 310 470 IPR023299 GO:0000166
Prci3g2006 999 MobiDBLite consensus disorder prediction 269 302 - -
Prci3g2006 999 ProSitePatterns E1-E2 ATPases phosphorylation site. 235 241 IPR018303 -
Prci3g2006 999 Gene3D - 512 719 IPR023214 -
Prci3g2006 999 SFLD C1.7: P-type atpase like 215 730 - -
Prci3g2006 999 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 969 - -
Prci3g2006 999 SFLD p-type atpase 215 730 IPR044492 -
Prci3g2006 999 MobiDBLite consensus disorder prediction 283 298 - -
Prci3g2006 999 Pfam Cation transport ATPase (P-type) 351 437 - -
Prci3g2006 999 FunFam Phospholipid-transporting ATPase 353 511 - -
Prci3g2006 999 Gene3D - 357 511 IPR023299 GO:0000166
Prci3g2006 999 Pfam Phospholipid-translocating P-type ATPase C-terminal 707 957 IPR032630 -
Prci3g2006 999 NCBIfam HAD-IC family P-type ATPase 169 255 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci3g2006 999 NCBIfam HAD-IC family P-type ATPase 650 761 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci3g2006 999 FunFam Phospholipid-transporting ATPase 510 719 - -
Prci3g2006 999 PRINTS P-type cation-transporting ATPase superfamily signature 679 698 - -
Prci3g2006 999 PRINTS P-type cation-transporting ATPase superfamily signature 233 247 - -
Prci3g2006 999 SUPERFAMILY HAD-like 228 734 IPR036412 -
Prci3g2006 999 SUPERFAMILY Calcium ATPase, transmembrane domain M 95 957 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2006 Prci-Chr3 34447404 34454050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2006 1 998 Primary Pumps ATPases AT3G27870 72.863 0.0 1545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2006 K01530 - gmx:100779714 1733.38