Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1985 ATGCCCACCACCCTCTCTCTTTTGCAATTGAGCAGGTCCCCTCCATCTCCCCCCTCTCTATTCTCGGCTGCGGAATCCGTTCACCTCGGAATCCGCCATGGAAGGATGTATAGAATAATATCCACGCCGGCCCATAAATTCCGCCAATTTGGGCGACTCCAAGTGAAGCCCTCCGGCGCCACCACCGAAGAGGAACACGCCCACCTCATCCTATGGCGTCACCAGATCCTCGACCCCGACAGCGACATTGTGGCACGTTGGAACAGGATCTTCCTTGTCACCAGTCTCATCGCGCTTTTCATAGACCCTCTTTACTTATATCTGCCTTCCATCGGAGGCCCCGGTTGCTTGCAAACCAATACAAAATTGAGCATCATCGTCACTCTTCTGCGCTCCTTCTCGGACCTTTTCTACGTGCTCCACATGATCATGAAATTTCGGACTGCCTTCGTGGCCCCAAATTCTAGGATTTTTGGTCGGGGTGAGTTGGTTACCGATGCCCGAGAAATTGCCAGACGCTACATGAAGTCTGATTTTGTCATCGATCTCGCCGCGACGCTCCCACTGCCCCAGATTGTCATTTGGCTAGTTATTCCAACGTCCTCAGCTGACCATGCCCACATCACTCTGGCTCTTTTCGTGCTCATTCAGTATGTTCCTCGACTGTTTCTGATCTTCCCGTTGAACAAGCGCATTGTCAAAACCTCTGGTGTTGTTGCCAAGACTCCCTGGACTGGAGCTGCATATAATCTTCTACTCTACATGCTAGCTAGTCATGTTACCGGAGCAACTTGGTATCTGTCTGCAATAGCACGACAATTGAATTGTTGGACTGAAGAGTGCAGAGCTGAGAACGAATTACAAACCCTGTCTTGCCTAATAAGTTATCTTGATTGTGGAACTTTGAACAACCCTGATAGGCAATACTGGCTAAATGTCACCAACGTTGTTAAAAGTTGCGATGTGAAGAGCGGGAATAACAAATATTCATTTGGGATGTTTCAAGCTGCTTTTAGGAAGGCAGTTGCTACTGGCAGTTTCAGTGAGAGATACTTTTATTGTCTTTGGTGGGGTATAAGAAATTTAAGTTCATATGGACAGAACTTGGACACCACTGTATTCATCGGGGAGACCCTTTTTTCCATCATCCTATGCGTTGTTGGACTAGTGCTCTTTGCACTTTTGATTGGGAACATGCAGACATACTTAGAGTCAATGTCAGCAAGACTTGAAGAATGGAGGATTAGGAAGAGAGATACAGATGAATGGATGAGGCATCGCCAGTTGCCTCCAGATTTGCAGGAACGTGTCCGTCGCTTTGGTCAATATAAATGGCTCGCAACAAGAGGAGTTGATGAGAAATCCATATTGCTTTCACTACCTTTAGATCTACGTCGTGAAATCCAACGCCACCTGTGTCTTGCTCTTGTTCGGCGTGTCCCTTTCTTTTCACAGATGGACGATCAGCTCCTTGATGCCATCTGTGAACACCTTGTCTCGTCCCTAAGCACTGAAGGCACCTACATTTTTCGAGAGGGTGATCCCGTAAATGAAATGGTGTTCATTATTAGAGGACAACTGGAGAGCTCCACTACCAATGGAGGAAGGTCGGGCTTCTTCAATTCTATTACCCTCAGACCTGGAGATTTCTGTGGCGAGGAACTATTGACATGGGCCTTAATGCCAAACTCTAGCTCAAACCTACCTTCTTCAACTCGAACTGTCAGGGCTCTCACCGAAGTCGAAGCTTTTGCGTTACAGGCGGAGGATCTCAAAGCTGTGGCGGCTCAGTTCAAGCGCCTCCATAGCAAGAAACTTCAACATGCTTTTAGGTATTATTCCCATCAATGGAGGGCGTGGGCAGCTTGCTTGATAGAGGCTGCTTGGAGAAGGTACAAGAAACGCAAGGCGTCTAGAGAGTTGTCGCTGAAAGAGAGCCTTTACTACATGGCAAAACCAGAGGGAGAAACTAGTTACAGCGACATGCTTGATGTTGATTTGGAGGACTCATCAAGGGACGCCGCAAGTAATAGAACTCAAGCTCTTGGTGCTACTGTTATGGCCTCCACCTTCGCTGCAAATGCAAGGAAAGGCACTAATGCTGGCCGTAAATCTCAGGGCGGTGATCCTGTACCCCAATTGTTTAAGCCTGATGAACCTGATTTCTCTGTGTTATAG 2178 0.477 MPTTLSLLQLSRSPPSPPSLFSAAESVHLGIRHGRMYRIISTPAHKFRQFGRLQVKPSGATTEEEHAHLILWRHQILDPDSDIVARWNRIFLVTSLIALFIDPLYLYLPSIGGPGCLQTNTKLSIIVTLLRSFSDLFYVLHMIMKFRTAFVAPNSRIFGRGELVTDAREIARRYMKSDFVIDLAATLPLPQIVIWLVIPTSSADHAHITLALFVLIQYVPRLFLIFPLNKRIVKTSGVVAKTPWTGAAYNLLLYMLASHVTGATWYLSAIARQLNCWTEECRAENELQTLSCLISYLDCGTLNNPDRQYWLNVTNVVKSCDVKSGNNKYSFGMFQAAFRKAVATGSFSERYFYCLWWGIRNLSSYGQNLDTTVFIGETLFSIILCVVGLVLFALLIGNMQTYLESMSARLEEWRIRKRDTDEWMRHRQLPPDLQERVRRFGQYKWLATRGVDEKSILLSLPLDLRREIQRHLCLALVRRVPFFSQMDDQLLDAICEHLVSSLSTEGTYIFREGDPVNEMVFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALMPNSSSNLPSSTRTVRALTEVEAFALQAEDLKAVAAQFKRLHSKKLQHAFRYYSHQWRAWAACLIEAAWRRYKKRKASRELSLKESLYYMAKPEGETSYSDMLDVDLEDSSRDAASNRTQALGATVMASTFAANARKGTNAGRKSQGGDPVPQLFKPDEPDFSVL 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1985 725 Gene3D - 90 405 - -
Prci3g1985 725 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 58 722 - -
Prci3g1985 725 SUPERFAMILY Voltage-gated potassium channels 78 404 - -
Prci3g1985 725 SUPERFAMILY cAMP-binding domain-like 411 607 IPR018490 -
Prci3g1985 725 Gene3D Helix hairpin bin 406 473 - -
Prci3g1985 725 FunFam Cyclic nucleotide-gated ion channel 1 480 598 - -
Prci3g1985 725 CDD CAP_ED 482 613 IPR000595 -
Prci3g1985 725 Gene3D Jelly Rolls 480 600 IPR014710 -
Prci3g1985 725 MobiDBLite consensus disorder prediction 696 725 - -
Prci3g1985 725 PRINTS EAG/ELK/ERG potassium channel family signature 395 404 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci3g1985 725 PRINTS EAG/ELK/ERG potassium channel family signature 377 388 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci3g1985 725 PRINTS EAG/ELK/ERG potassium channel family signature 445 452 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci3g1985 725 PRINTS EAG/ELK/ERG potassium channel family signature 351 368 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci3g1985 725 PRINTS EAG/ELK/ERG potassium channel family signature 142 151 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci3g1985 725 FunFam Cyclic nucleotide-gated ion channel 1 409 473 - -
Prci3g1985 725 SMART cnmp_10 482 613 IPR000595 -
Prci3g1985 725 ProSiteProfiles cAMP/cGMP binding motif profile. 482 612 IPR000595 -
Prci3g1985 725 Pfam Ion transport protein 87 409 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci3g1985 725 Pfam Cyclic nucleotide-binding domain 505 597 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1985 Prci-Chr3 34236916 34240181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1985 70 724 Ion Channels AT5G14870 66.766 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1985 K05391 - gmx:100802812 1067.76