Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1983 ATGTCAAGAAACAGGTATGAGTGGTTATATAACCACACCCATTTGAAGATGGCTTGGATTCCTCATCAAATCCAGGAAAAAGATGGGTATTTGAACTACCCACCACCGGTTTTGTCTTCATATCCATCCTCATTCCCAGGTTCTCTCCGCGACGAATCAATGTCTTCTTCGTCATCACCTCCATCCGGTGGCAGTACTAGAATTAGTCCGGCTGTTCTTTTCATTATAGTGATTCTAGCTGTGTTGTTTTTCGTATCTGGTCTGCTTCATCTGCTTGTCAGATTTCTCGCGAAGCACCCATCATCTGCTCCGTCTGCTCAATCCAACGGACACCAGGACATTTCTAGCTCTGATGCTCTGCAGAGACAGCTCCAGCAACTTTTCCATCTCCATGACTCAGGGCTGGATCAAGCTTTCATTGACGCACTTCCTGTTTTCCAGTACAGAGAAATCGTGGGTCTGAAAGAGCCATTTGACTGTGCTGTTTGTCTCTGTGAATTCTCTGAAAATGACAAGCTCAGATTGCTTCCTACCTGCAGCCATGCTTTTCACATCGATTGCATAGACACCTGGCTCCTATCCAATTCGACATGCCCACTCTGCAGAGGAACCCTCTTCACTCCAGGACTCTCAGTCGAAAACCCGATGTTTTATTTTGACGATCCAAGGGAAGAAGATGGGTGCCCTTGCAATGGAGAAAGTGGAGTAACTACCAGCCAAAAATCTGTGGAAATCGAAGAAATCGTAGAGAAAGCTGTTCTCCCTGTAAGACTCGGTAAATTCAGAAGGCTCAATATGGATGCAGAGGATGATAATGCAGGAGGAGAGACTAGTAGCAGTAATTTGGATGCAAGAAGATGTTTCTCAATGGGGTCTTACCAGTATGTGCTCGGCAACTCAGACCTGCGAATTACATTGAACGGTGACAGAAGACTTTCAGGTGGAGCAGAACAGACTGATAAGCTTTCAGTGGAGGGCGATAAGGAAGCCAAAAAGATTACAAGTGTGAGTAAGGGTGAGAGCTATTCTGTTTCGAAAATCTGGCTGTGGTCCGACAGGGGAAAATTTTCTAGTTCTTCGGATGATCAAATGGGCATGCCATCTTCTCTCCGCGCAGATTTGCCTTGGATGAGGGCAAGGACAACGGAAGGAACCTAA 1158 0.4594 MSRNRYEWLYNHTHLKMAWIPHQIQEKDGYLNYPPPVLSSYPSSFPGSLRDESMSSSSSPPSGGSTRISPAVLFIIVILAVLFFVSGLLHLLVRFLAKHPSSAPSAQSNGHQDISSSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYREIVGLKEPFDCAVCLCEFSENDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRGTLFTPGLSVENPMFYFDDPREEDGCPCNGESGVTTSQKSVEIEEIVEKAVLPVRLGKFRRLNMDAEDDNAGGETSSSNLDARRCFSMGSYQYVLGNSDLRITLNGDRRLSGGAEQTDKLSVEGDKEAKKITSVSKGESYSVSKIWLWSDRGKFSSSSDDQMGMPSSLRADLPWMRARTTEGT 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1983 385 FunFam RING-H2 finger protein ATL46 122 207 - -
Prci3g1983 385 MobiDBLite consensus disorder prediction 356 385 - -
Prci3g1983 385 CDD RING-H2_EL5-like 159 202 - -
Prci3g1983 385 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 207 IPR013083 -
Prci3g1983 385 SUPERFAMILY RING/U-box 139 208 - -
Prci3g1983 385 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 65 348 - -
Prci3g1983 385 ProSiteProfiles Zinc finger RING-type profile. 160 202 IPR001841 -
Prci3g1983 385 SMART ring_2 160 201 IPR001841 -
Prci3g1983 385 Pfam Ring finger domain 159 202 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1983 Prci-Chr3 34205029 34206969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1983 57 355 C3H Transcription Factor Family AT2G18650 42.771 1.70e-59 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1983 - - qsa:O6P43_004596 542.347