Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1980 ATGGAACAATTTTCCATGTGGATAATCTTCTTGTCATTTCTTCTCCACTTGAACACTAGTAACTGTGTGGAGGACGAGGTCAGCAGCACACTGATAAACTTTCTTGCAAAACTCTCTAACAACGATGGCAGCCAGAACTCTAATTTGGTTTGGAAGCCAGGCTCTCATCCCTGCAAGGACTTGTGGCAGGGTGTGGTATGTAATGAAAAAAATGCATCAGTACAGAAGCTATTTCTTAACAGGTCCAATTTAGCTGGAACTCTTGATGTTGCCATGCTCTGCAACTCGCGGCCAATCGTCATGTCTCTTACATCTCTTAACCTCGACGGCAACAAAGTAAGTGGAGGAATAGCAAATGAGGTTGGAAACTGCAAGCATCTCACTCACTTGAATGTAAGTGGTAATCAACTTCATGGGATCCTTCCTAGTTCACTTGCCATGTTGAGTTACTTAAAAGAGCTTGACATTTCCAACAATAAGTTCTCCGGGAACTTGCCAAACCTGTCCAGAATCTCTGGTTTGAATACCTTTTTGGCACAAAATAATCAGCTCACTGGGGAGATACCTCCTTTTAACTTTTCCAAATTTGACTACTTCAATGTATCCTTCAACGATTTAAGTGGCCGCGTTCCATATTTGCAAAGCCATTTCACTGAGGATAGTTTCTTGGGAAATCCTGAGCTTTGTGGAAATCCTTTGCCAAATAACTGTTCATCTCTCCCTACATCTGATGCTAAACTGTCTGATTCAGAAGAATCGAAGGGTCCCTCAAAAAGCCAGATTCTCATGTATTCAGGCTATGCTGCAATGTGTTTGGTCTTTATCCTTTTTGTAGTTCTTGCGCTGTGTAAAAGAAACAAGACAGGAAACAAGGTTGAAGCAGAAAAGGAGGCAATTGATGATAGTACTATTGACAAGCCCAGCCATGTTTCAAATGAATACAAATTAGGCGTGAGCAGATCAGAGTTTTCAGTCACTTCCGAAAGTGCAATGGCTTCACGATCATTTGCAGTTCTTTCAAAGTCATATGAAAATGATATTACATTGGAGGGTTTGATGAGGTCTCCTGCTGAGCTGATTGGCCGAGGAAAGTTTGGTAGTCTTTATAAAGTACTGCTTGACAATGGGATGATGGTGGTTGTTAAGAGGATTAAAGACTTGACTATATCAAGCCATGACTTCAAACAAAGGATGCATTTGCTGAACCAAGTGAAGCACCATTCTTTACTCTTACCTCTTGCTTTCTATTGTTCCCAACAAGAGAAACTTTTGCTCTATGAATATCAAGAGAACGGAAGTTTATTCAAGATTCTACATGGTTCCTCAAAAGACTTCGATTGGACTAGTAGACTTGGGATTGCAGCAGCAATTGCGGAGTCATTAGCTTTCATGCATCAAGAGCTTGAACAACATGGGATTGCACATGGCAACTTAAAATCCTCTAACATTTTGCTAAACAAGAATATGGAACCCTGCATAAGCGAGTATGGGGTTATGGTTATGGATGATCAAGAAATTAAAATTCAACAGAGTTCCTCTTTTGCAAGTTCATTTGCAGCTGGCGCGTCAGATGCTTTCAAGGGAGATGTTTATGGCTTTGGAGTGATTCTTCTGGAACTACTCACTGGGAAGTTAGTGAAGAGCAATGGGATGGATTTAACTGAGTGGGTTGAGTCTGTTGTAAGGGAAGAATGGACGGGTGAAGTATTTGACAGGACCCTGATATCAGAGTATGTGAGTGAAGAGAGGATGGTGAGCTTGCTCCAGGTGGCTATAAGATGTATCAATCAGTCCCCAGAGGCCAGGCCAAGCATGAATCAAGTTGCTCTCATGATCAACGTCATAAAAGAGGAAGAAGAGAAATCCTTGATTTATGAAGCATTGTGA 1887 0.4134 MEQFSMWIIFLSFLLHLNTSNCVEDEVSSTLINFLAKLSNNDGSQNSNLVWKPGSHPCKDLWQGVVCNEKNASVQKLFLNRSNLAGTLDVAMLCNSRPIVMSLTSLNLDGNKVSGGIANEVGNCKHLTHLNVSGNQLHGILPSSLAMLSYLKELDISNNKFSGNLPNLSRISGLNTFLAQNNQLTGEIPPFNFSKFDYFNVSFNDLSGRVPYLQSHFTEDSFLGNPELCGNPLPNNCSSLPTSDAKLSDSEESKGPSKSQILMYSGYAAMCLVFILFVVLALCKRNKTGNKVEAEKEAIDDSTIDKPSHVSNEYKLGVSRSEFSVTSESAMASRSFAVLSKSYENDITLEGLMRSPAELIGRGKFGSLYKVLLDNGMMVVVKRIKDLTISSHDFKQRMHLLNQVKHHSLLLPLAFYCSQQEKLLLYEYQENGSLFKILHGSSKDFDWTSRLGIAAAIAESLAFMHQELEQHGIAHGNLKSSNILLNKNMEPCISEYGVMVMDDQEIKIQQSSSFASSFAAGASDAFKGDVYGFGVILLELLTGKLVKSNGMDLTEWVESVVREEWTGEVFDRTLISEYVSEERMVSLLQVAIRCINQSPEARPSMNQVALMINVIKEEEEKSLIYEAL 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1980 628 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Prci3g1980 628 Gene3D Transferase(Phosphotransferase) domain 1 430 626 - -
Prci3g1980 628 Gene3D Ribonuclease Inhibitor 21 212 IPR032675 -
Prci3g1980 628 Pfam Protein tyrosine and serine/threonine kinase 358 609 IPR001245 GO:0004672|GO:0006468
Prci3g1980 628 Gene3D Phosphorylase Kinase; domain 1 338 428 - -
Prci3g1980 628 PANTHER OS05G0588300 PROTEIN 8 617 - -
Prci3g1980 628 SUPERFAMILY Protein kinase-like (PK-like) 357 612 IPR011009 -
Prci3g1980 628 ProSiteProfiles Protein kinase domain profile. 354 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1980 628 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Prci3g1980 628 SUPERFAMILY L domain-like 54 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1980 Prci-Chr3 34199285 34201453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1980 28 616 Receptor kinase-like Gene Family AT1G68400 33.861 1.31e-90 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci3g1980 PK_Tyr_Ser-Thr 1.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1980 - - gmx:100813796 816.609