Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1979 ATGACCCTGAGATTCAGACCCCCAAAAAAAAATCATGACCCTGAGATGCCCAAACCCTTTGGTGGAACGGGGAAAGGGGAAGAGACAGAAGTGGCGAGGATGTACTTCTACAAGGATGTTGTCCCACTATGCGCATTGATTGCTATAGAGTGCATTAACGTTGGTGCTAGCATTCTGTTCAAAGCAGCCACTTTCAATGGCGTCAATTACTACGTCTTCACCATCTATGCTTCTGCAATTTCTACTCTGGTTCTTCTTCTACCTCTGCCCTTCATCCTCCGCCGGTCAACTGGGCTTCCTCCATTCAAGTCGTCTCTGCTTTTCTGGATTTTCCTTCCCAGACTGATCGGCCTTGGAGCTCGCCTCTGCGGAGCCAAAGCAATTGAATACAGTTCACCTACTCTTTCTGCTGCTATGAGCAACCTCACCCCTGCTTTTACCTTCATACTCGCCATCTTCTGCAGGATGGAAAAGGTAGAGTTACGAAGTTCAAGCACTCAGGCCAAAATCATAGGTACAGTAGTATCCATAGTCGGTGCACTCGTAGTTGTTCTCTTCAGGGGTCCTCCACTCAAGTCAGCATCTTCTCCATCACCAACTCATCCAACAAGCTCTCAACTGAATTCTGCATCAACACAAACGAAATGGGTTCTCGGTGGCTTCCTGCTTCTTGTTGAGTGTCTTCTGGTTCCAATCTGGTATATTGTTCAGACCCATGTTATCAACGAATATCCGGCAAAGCTGATAGTGGTGTTTTTATACAACCTGTGCGGGACTATTATATCTGCACCAGTCTGTTTAATAGCAGAACCAGACCTGAGTGCTTGGAAGATAAAGCCTGACATAACACTGCTCTCCATTATTTACTCAGGATTCTTATGCACATGCTTAAGCCGTCTGATTGAAACATGGGGTCTCCATCTGAAAGGCCCAGTGTATGTGTCAACGTTCAAGCCCCTTTCCATCGCCATGGCAGCTGCTATGAGTGTCATTTTCCTGGGCGATGTTCTGCATCTAGGCAGCGCTATTGGAGCGGCAATACTGTCGGTGGGGTTTTATGGTGTGATATGGGGGAAAGCGAAAGGGGAAGAAGAGTTGAAAGAGCAGTGCGAGTCAGGCAGCTCACAATCCCAACCGAATTGCAAGACTCCTTTGTTGCAGAGCTACGTTGATATGTGA 1179 0.4724 MTLRFRPPKKNHDPEMPKPFGGTGKGEETEVARMYFYKDVVPLCALIAIECINVGASILFKAATFNGVNYYVFTIYASAISTLVLLLPLPFILRRSTGLPPFKSSLLFWIFLPRLIGLGARLCGAKAIEYSSPTLSAAMSNLTPAFTFILAIFCRMEKVELRSSSTQAKIIGTVVSIVGALVVVLFRGPPLKSASSPSPTHPTSSQLNSASTQTKWVLGGFLLLVECLLVPIWYIVQTHVINEYPAKLIVVFLYNLCGTIISAPVCLIAEPDLSAWKIKPDITLLSIIYSGFLCTCLSRLIETWGLHLKGPVYVSTFKPLSIAMAAAMSVIFLGDVLHLGSAIGAAILSVGFYGVIWGKAKGEEELKEQCESGSSQSQPNCKTPLLQSYVDM 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1979 392 Pfam EamA-like transporter family 219 356 IPR000620 GO:0016020
Prci3g1979 392 MobiDBLite consensus disorder prediction 1 23 - -
Prci3g1979 392 PANTHER WAT1-RELATED PROTEIN 41 369 IPR030184 GO:0016020|GO:0022857
Prci3g1979 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 271 361 - -
Prci3g1979 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 80 187 - -
Prci3g1979 392 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1979 Prci-Chr3 34175458 34177370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1979 24 389 Nodulin-like Gene Family AT5G40230 54.496 1.29e-129 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1979 - - pcin:129305533 753.821