Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1978 ATGGCGAGGATGTATTTTTACAAGGATGTTGTTCCACTCTGTGCACTTATTGCAATAGAGAGCATTAACGTTAGTGCCAGCATTCTGTTCAAAGCAGCCACTCTCAAAGGCATGGATTACTACGTCTACATTGTCTATTCCACTGCTGTTTCCACTCTGGTTCTTCTTCTCCCTCTTCCCTTCATTCTCCGTCGGTCCGCTGGGCTTCCTTCATTCACACCGTCTCTGCTTTTCAGAATTTTCCTCCTTGGACTGATCGGGCTTGGAGCGCAGCTTTGCGGAGCCAAAGCCATTCAGTACAGTTCACCCACTCTGGCTGCTGCGATGAGCAACCTGATTCCCGCTTTTACCTTCATACTCGCCGTCTTCTTCAGGATGGAAAAGGCAGAATTAACGAGTTCCAGCACTCAGGCCAAGATCATGGGTTCGGTGGTATCCATAGCCGGTGCACTCGCAGTTGTTCTCTTCAGGGGTCCTCCACTTATACCAGCATCTTCTCCATCTCCACCTCCTCCTCCTCCAGCAAATTCTTCAGTGGATTCATCATCCCCGCAAACGAAATGGGTTCTCGGTGGTTTCCTACTTCTTGTTCAGTACCTTCTAGTTCCAATCTTGTATATTGTTCAGACCCAAGTTATAAAAGAATATCCAGCAAAGCTGATAGTGGTGTTCTTGTACAACCTTTGCGGGACTATTATATCAGCACCAGTGTGTTTCATAGCACAACCGGACCTGAGTGCTTGGAGGATAAAGCCTGACATCACATTGATCTCCATTATTTACTCAGGACTCTTTGTCACGTTCTTAAGCTGTCTGATTCACATGTGGGGTCTCCATCTGAAAGGCCCTGTGTATGTGTCAATCTTCAAGCCGCTCTCGATCGCCATTGCAGCTGCTATGAGTGTCATTTTCCTGGGCGATGCTCTGCATCTAGGCAGCGTTATTGGAGCAGTAATACTGTCGGTCGGCTTTTATGCGGTGATATGGGGGAAAGCGAAAGAGGAAGAAGAGTTGAAGGAGAACTATGGCTTAAGCAGCTCAGAAGTGCAACCACATTGCAGGACTCCCTTGTGGCAGAGCTACAACAAAGGGGAAGACGGAATGGCATGTAACGAAACTCAGGTACAGGTTTATGACTTATGCAAGCAGGAAACAGTGTAG 1161 0.4755 MARMYFYKDVVPLCALIAIESINVSASILFKAATLKGMDYYVYIVYSTAVSTLVLLLPLPFILRRSAGLPSFTPSLLFRIFLLGLIGLGAQLCGAKAIQYSSPTLAAAMSNLIPAFTFILAVFFRMEKAELTSSSTQAKIMGSVVSIAGALAVVLFRGPPLIPASSPSPPPPPPANSSVDSSSPQTKWVLGGFLLLVQYLLVPILYIVQTQVIKEYPAKLIVVFLYNLCGTIISAPVCFIAQPDLSAWRIKPDITLISIIYSGLFVTFLSCLIHMWGLHLKGPVYVSIFKPLSIAIAAAMSVIFLGDALHLGSVIGAVILSVGFYAVIWGKAKEEEELKENYGLSSSEVQPHCRTPLWQSYNKGEDGMACNETQVQVYDLCKQETV 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1978 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 333 - -
Prci3g1978 386 Pfam EamA-like transporter family 17 154 IPR000620 GO:0016020
Prci3g1978 386 Pfam EamA-like transporter family 193 328 IPR000620 GO:0016020
Prci3g1978 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 157 - -
Prci3g1978 386 PANTHER WAT1-RELATED PROTEIN 11 340 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1978 Prci-Chr3 34161456 34163725 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1978 1 335 Nodulin-like Gene Family AT5G40240 56.119 4.31e-130 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1978 - - pcin:129305533 474.937