Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1965 ATGGCAGGTGGAACCGAAGCCTTCCCGGATTTGGGATCACACTGCCATCACGTTGATTGCAATCAACTCGATTTCCTCCCTTTCACATGCGACGCTTGCTCTCAGGTTTTCTGCTTGGAACACAGATCTTACAAGTCCCACGACTGCCCCAAATCAGACCATAACAGCAGGAAGGTTGTGATTTGCCCATCATGTTCCATGTCAATGGAGACCACCGGTTATAATGAACACGACGAGAAGGCTATATTGGAGAAGCATGACAAATCTGGAATGTGTGACCCCGGCAAGAAGAAAAAGCCCACTTGTCCTGTTGGGAGATGCAAGGAGGTCTTGACATTTTCTAATACCTGTATTTGTAAAACTTGCCAGCTCAAGGTGTGCCTCAAGCATCGGTTTCCTGCGGACCACGCATGTAAAGGAGTAACATCCGCTTCATTGTCATCACCTGAAGCTACTGCAAATTGGGGATGGAAGGATCGATTCTTGGCTGCTTTGACTTGGATGAAGGGACAACAGTGCTCCAAAAGCAGGGGTCAAAGCACCTCTTCTCGTGCTCCATCTGTTAAAATCTGCTGA 576 0.4792 MAGGTEAFPDLGSHCHHVDCNQLDFLPFTCDACSQVFCLEHRSYKSHDCPKSDHNSRKVVICPSCSMSMETTGYNEHDEKAILEKHDKSGMCDPGKKKKPTCPVGRCKEVLTFSNTCICKTCQLKVCLKHRFPADHACKGVTSASLSSPEATANWGWKDRFLAALTWMKGQQCSKSRGQSTSSRAPSVKIC 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1965 191 Gene3D - 2 66 IPR035896 -
Prci3g1965 191 SUPERFAMILY AN1-like Zinc finger 93 143 IPR035896 -
Prci3g1965 191 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270
Prci3g1965 191 Gene3D - 77 155 IPR035896 -
Prci3g1965 191 SUPERFAMILY AN1-like Zinc finger 5 59 IPR035896 -
Prci3g1965 191 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 178 - -
Prci3g1965 191 Pfam AN1-like Zinc finger 102 140 IPR000058 GO:0008270
Prci3g1965 191 Pfam AN1-like Zinc finger 15 52 IPR000058 GO:0008270
Prci3g1965 191 ProSiteProfiles Zinc finger AN1-type profile. 96 146 IPR000058 GO:0008270
Prci3g1965 191 SMART AN1_Zf_4 102 143 IPR000058 GO:0008270
Prci3g1965 191 SMART AN1_Zf_4 15 54 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1965 Prci-Chr3 34043069 34043969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1965 2 173 C2H2 Transcription Factor Family AT3G28210 60.345 7.84e-73 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1965 - - pcin:129305124 405.601